Gene Hoch_5665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5665 
Symbol 
ID8548079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7775277 
End bp7775948 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content72% 
IMG OID646390333 
ProductPhosphoribosylanthranilate isomerase 
Protein accessionYP_003270035 
Protein GI262198826 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0135] Phosphoribosylanthranilate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.433407 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.267322 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAGAC GAACGCGCGT CAAGATCTGT TGCATTTCCT CTCGCGACGA AGCCCGCCGG 
GCCATCGCGG CGGGAGCCGA CGCGCTCGGG TTGGTGAGCG ACATGCCCTC GGGCCCCGGC
ATCATCTCCG ACGAGCTGGC CCAGCGCGTG GTGCGCGAGA CGCCGCCGCC GGTGTCGTGT
TTCTTCCTCA CCCTGCGCGA GCGCGCCGAC GCCATCGCCG AGCAGGCGCG CGCGTGCGGC
GCCGACACCG TGCAGGTCGT CCACCACATC GACCCCGGCG AGTATCCGCG GCTCATGGAG
GCCGTGCCCA ACCTGCGCCG GGTGCAGGTC ATCCACGTCG AGGATGCGAG CGCGCTCGAG
CTGATCGAAC GCTACGCGCC CTACGTGCAC ATGTTCTTGC TCGACAGCGG TCGGCCCAAT
GCACCGGTGG CCGAGTACGG CGGCACCGGC CGGGTGCACG ACTGGGCCAT CAGCGCCGAG
TTCGTGCGCC GCTCGCCGCT GCCCGTGATG CTCGCCGGCG GGCTCACGCC CGAGAACGTC
GCCGGAGCCA TGGCGCAGGT CGCGCCCTAC GGCCTCGATC TGTGCTCGGG CGTGCGCACC
GAGGGCGCGC TCGACGACGC CAAGCTGGGC GCGTTCATGC GCGCGGTGCG CGCCGCCGAG
CGCGCCGCCT GA
 
Protein sequence
MARRTRVKIC CISSRDEARR AIAAGADALG LVSDMPSGPG IISDELAQRV VRETPPPVSC 
FFLTLRERAD AIAEQARACG ADTVQVVHHI DPGEYPRLME AVPNLRRVQV IHVEDASALE
LIERYAPYVH MFLLDSGRPN APVAEYGGTG RVHDWAISAE FVRRSPLPVM LAGGLTPENV
AGAMAQVAPY GLDLCSGVRT EGALDDAKLG AFMRAVRAAE RAA