Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_5648 |
Symbol | |
ID | 8548062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 7753313 |
End bp | 7753795 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 646390316 |
Product | sugar-phosphate isomerase, RpiB/LacA/LacB family |
Protein accession | YP_003270018 |
Protein GI | 262198809 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0698] Ribose 5-phosphate isomerase RpiB |
TIGRFAM ID | [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family [TIGR01120] ribose 5-phosphate isomerase B |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.609634 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.681058 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGTGGT TCGCGGGTGC GGACCACGCC GGCTACGAGC TCAAGCAGCA GCTCGTGGCC GTGTTGCGCG CGCTGGGCGA TGAGGTCGAG GACCTCGGCA CCCACGGCAG CGAGTCGGTC GACTATCCTG ACTTCGGCGC CGCGGTCGGC CGCAAGGTCG CAGCCGAGGC CGGCACCCTG GGCCTGGTGG TGTGCGGCAG CGGCATGGGC ATCTGCATCG CGGCCAACAA GATCGCCGGC GTGCGCGCGG TCGCGGTGAG CTGCGCCTAC GCGGCGCGCA TGGCGCGGGC CCACAACGAC GCCAACGTGC TGGCGCTGGG CCAGCGCATC GTCGGCGTCG GCGTGGCCGA GGACGCCCTA CGCGCGTTCC GCGACGGCGT CTTCGAGGGC GGCCGCCACC AGCGCCGCGT CGACAAGCTG AGCGCGCTCG AGGGCGCCGA CCCGGCCGCG GGCGCGGACC CCGCGGGTGC GGACTCGGTC TGA
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Protein sequence | MKWFAGADHA GYELKQQLVA VLRALGDEVE DLGTHGSESV DYPDFGAAVG RKVAAEAGTL GLVVCGSGMG ICIAANKIAG VRAVAVSCAY AARMARAHND ANVLALGQRI VGVGVAEDAL RAFRDGVFEG GRHQRRVDKL SALEGADPAA GADPAGADSV
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