Gene Hoch_5648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5648 
Symbol 
ID8548062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7753313 
End bp7753795 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content75% 
IMG OID646390316 
Productsugar-phosphate isomerase, RpiB/LacA/LacB family 
Protein accessionYP_003270018 
Protein GI262198809 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR01120] ribose 5-phosphate isomerase B 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.609634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.681058 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGTGGT TCGCGGGTGC GGACCACGCC GGCTACGAGC TCAAGCAGCA GCTCGTGGCC 
GTGTTGCGCG CGCTGGGCGA TGAGGTCGAG GACCTCGGCA CCCACGGCAG CGAGTCGGTC
GACTATCCTG ACTTCGGCGC CGCGGTCGGC CGCAAGGTCG CAGCCGAGGC CGGCACCCTG
GGCCTGGTGG TGTGCGGCAG CGGCATGGGC ATCTGCATCG CGGCCAACAA GATCGCCGGC
GTGCGCGCGG TCGCGGTGAG CTGCGCCTAC GCGGCGCGCA TGGCGCGGGC CCACAACGAC
GCCAACGTGC TGGCGCTGGG CCAGCGCATC GTCGGCGTCG GCGTGGCCGA GGACGCCCTA
CGCGCGTTCC GCGACGGCGT CTTCGAGGGC GGCCGCCACC AGCGCCGCGT CGACAAGCTG
AGCGCGCTCG AGGGCGCCGA CCCGGCCGCG GGCGCGGACC CCGCGGGTGC GGACTCGGTC
TGA
 
Protein sequence
MKWFAGADHA GYELKQQLVA VLRALGDEVE DLGTHGSESV DYPDFGAAVG RKVAAEAGTL 
GLVVCGSGMG ICIAANKIAG VRAVAVSCAY AARMARAHND ANVLALGQRI VGVGVAEDAL
RAFRDGVFEG GRHQRRVDKL SALEGADPAA GADPAGADSV