| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5643 |
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| Symbol | |
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| ID | 8548057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 7747349 |
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| End bp | 7748248 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646390311 |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_003270013 |
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| Protein GI | 262198804 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.776137 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGCCG AGCTCGACAT CGACCGCGCG TGCGACCTCT ACTTCCAGCA TCTCAAGGTC
GAGCGCAACC TGTCCGTGCA CACGATCGAG GGCTACAGCC GCGACCTCGC CCGGCTGCGG
CGGTTTCTCG CCGAGCGCGC GTGCATCGCG GTGGCCTCGG TGCGCCCGGC CGACTTGGCC
GATTATCTGC TGGCGTTGGC CGACGAGCTC GGCGCCCGCA GCCGCGCCCG GGCCTCGGCC
GCCATCCGCG GATGGTTTCG CTTTTTGGTG AGCGAGCGCT ATCTCGAGCG CGATCCCGCC
GAGCACCTGG CCACGCCGCG CGCGCTGCGG CCGCTGCCCG TGGTCATCGG CGAGCAGGCG
GTGACCGAGC TTCTGGCCGC GCCGCCGACC ACCACGCCGC GCGGCCTGCG CGACGGCGCC
ATGATCGAGA CCCTGTACGC CACCGGCCTG CGCGTGTCCG AGCTGGTCGG TCTGCTGATG
GCCGACGTGC ACCTCGATCC CGGCTATCTG CGCGTGCTCG GCAAGGGCCG CAAGCAGCGC
CTGGTGCCGC TGGGCGAGAT GGCCTGCGCG CGCATCGAGG CGTACGTCAG CGGCGCCCGC
GGCTCGTTCC TCAAGAACCC CAAGCAGCCG GCGCTGTTCT TGACCGGGCA CGGCAAGCCC
ATGACTCGCC AGGGCTTCTG GAAGCTGCTC AAGCGCTACG CGCGCGGCGT GGGCATCGCC
GAGATCTCGC CGCACAAGCT GCGGCACTCC TTCGCCACCC ATCTGCTCGA GCACGGCGCC
GACCTGCGCG CGGTGCAGGC CATGCTCGGC CACGCCGACA TCTCGACCAC CCAGATCTAC
ACCCACGTGA GCCGGGCCCG CCTGGTGGCG CTGTATGAGA AGCACCATCC GCGGGCCTGA
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| Protein sequence | MAAELDIDRA CDLYFQHLKV ERNLSVHTIE GYSRDLARLR RFLAERACIA VASVRPADLA
DYLLALADEL GARSRARASA AIRGWFRFLV SERYLERDPA EHLATPRALR PLPVVIGEQA
VTELLAAPPT TTPRGLRDGA MIETLYATGL RVSELVGLLM ADVHLDPGYL RVLGKGRKQR
LVPLGEMACA RIEAYVSGAR GSFLKNPKQP ALFLTGHGKP MTRQGFWKLL KRYARGVGIA
EISPHKLRHS FATHLLEHGA DLRAVQAMLG HADISTTQIY THVSRARLVA LYEKHHPRA
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