Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_5617 |
Symbol | |
ID | 8548031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 7712628 |
End bp | 7714181 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 646390288 |
Product | transglutaminase domain protein |
Protein accession | YP_003269990 |
Protein GI | 262198781 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0710722 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACATCT TCGAGGCGGG CCACGGCCGC CCATTGTGCC CCGTCCTCGG CGGCGGCGCT ACGATCGGCT ACGATAGCAG CGTGCTGCGG GTGCTGATGG CCATCGCGAT CGCGACCAGC GCGCTCCACT GCGCGCCGCG TTCGACGCCG GAGTGGACGT CGCCCGCGCC CGAGGGGCCC GTGCCCCAGG CCTCGCTGAT CGGCTACGAG GCGCACTTTC ACATCACCTG GAACGGCGCC CGCATCGGCG ATGCCCACGA GAGTCTGCGC GCCCAGGACG AGGGCCTGCG CTTCTCGCGC GGCGAGCATA TCGCCGCCCG CCGCGGCGAC GCAGTGGTCC ACGGCGAGAC CAATATCGCC ATCGACACCG ACGCCGCGCT GCGCGCCGAG CGCGTGGCCC TGCGCCAGCT CGCCAGCGGC GCCGAACGCC GCGGCACGGC CGAGCGCAAC GCGCGCGGCG ACTGGGTGGT GCGCTTCGCC GACGAGCCGC TGCGCCAGCT CCCGGGCGAG GTGGTCCCGG CCGAGCTGGT GCCGCTGCGC ATCGCGGCCG CGGCACAGAG CGCGGCCGTG CCCTTCGACG GCGCCGTGAT GCTGCCCGGC TATGGCTTCG CCGTGGCCCA CCTGCGCGTG GACCGGGAGG CGCCGCAGCG CCTGCTGGCC ACCTTGACCA TCGACGACGG CGCGGCCGTG CTGCGCAGCC GCTTCCACCT GGCGCAGAAC GGCACCCTGG TGCGCATCGA GGGCGAGGAC GGCAGCGGCT CGCGGCGCGT CGATGCCGCG GCCGCGGCCG AGCCCTTCGC GCCGCCCGAG ATCGTCGACA GCGCCAGCAT CGCGCTGGCC CCGCCGCGGC CCGCGGGCGC GGGCGAATCC AACAGCCTGG TGCTGGGCCC GATCGCGCGC GAGCGTCCGC CGCCGCCGCC GCTGCCGGGA CAGCACATCG AGATCCTGGG CGACGCCTGG CATGTGCGCC TCGGCGCCGG CGACGCCCTG CCGCCGCTGG TTCACGCGAC GCCGTATCGC GCGCTGGCGC CGAGCGCCGC GCTCGACGCC GAGGCCGCCG CGCTGGCCGC CGAGATCGTC AGCGCCTCCC GGGTGCCGCC GGGACGCCGG GCCGCGGCCT TTGCGCTGGC CCGGGCCACC GCCTCGCTGC TCGCCGACGA CCTGGGCACA CCGGGCGACA CCGCGCGCAC CGCGCTGATG CTCGGCCGCG GCGACTGCAC CGCCCACGCG CTGCTGTTCG CCGAGCTCGC CCGCGCCCGC GGCATTCCCG CGCGCCTGGT CACCGGCTAT CGCATCGACG GCGCTCGCCT GCTGCGCCAC CGCTGGGCCA TCGTCGCCCT CGACGGCGAG TGGATCGCGG TCGATCCCAC CTACGGCGAG GCCCCGGCCG CGCCCCGGCT CATCGGTCTG GCGGTCCACG GGCCGCGCGC CGCCGAGCTG GCCATGGCCG ACGAGGCCGC CTTCGCCGGG CTGGCGCGGG TGCGCGCCTT CGCGTGTCCG AGCGCCGAGA TCAGCGCCCG GCTGTGCGAC CCGTCCAGTC TTCGTATTCC TTGA
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Protein sequence | MHIFEAGHGR PLCPVLGGGA TIGYDSSVLR VLMAIAIATS ALHCAPRSTP EWTSPAPEGP VPQASLIGYE AHFHITWNGA RIGDAHESLR AQDEGLRFSR GEHIAARRGD AVVHGETNIA IDTDAALRAE RVALRQLASG AERRGTAERN ARGDWVVRFA DEPLRQLPGE VVPAELVPLR IAAAAQSAAV PFDGAVMLPG YGFAVAHLRV DREAPQRLLA TLTIDDGAAV LRSRFHLAQN GTLVRIEGED GSGSRRVDAA AAAEPFAPPE IVDSASIALA PPRPAGAGES NSLVLGPIAR ERPPPPPLPG QHIEILGDAW HVRLGAGDAL PPLVHATPYR ALAPSAALDA EAAALAAEIV SASRVPPGRR AAAFALARAT ASLLADDLGT PGDTARTALM LGRGDCTAHA LLFAELARAR GIPARLVTGY RIDGARLLRH RWAIVALDGE WIAVDPTYGE APAAPRLIGL AVHGPRAAEL AMADEAAFAG LARVRAFACP SAEISARLCD PSSLRIP
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