Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_5613 |
Symbol | |
ID | 8548027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 7707881 |
End bp | 7708561 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 646390284 |
Product | hypothetical protein |
Protein accession | YP_003269986 |
Protein GI | 262198777 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0716122 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.161209 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAATA CGGCGGAGCT GATTCAGTTT CGCCACCTCG GTTTCGAGAA CTTCGATTTC GTGGTTCTGT CCGTCATCCT GGGCCGCCTG ACCATCGCAG CCCTGCTCGG AGGCATCATC GCCTACCGGC CGTGGCGCTA CTTCATGCAC TGGTATTTCG AGCGCACGGA GAGCGGGGCC CAGGTGCTCA TCGCGGTGAC CGGCGCGCTG ATGACCAGCG TGATCGGCAA CAACGTGGCC CTGGCCTTCG GTCTGGTCGG TCTCGGCGGC TTCATCCGCT TCCGCTCGGG CATCAAAGAT CCGCGCGAAG CCGGCGTCAT GTTCCTGATG ATCGGCATCG GCATGTCGAG CGGTATCGGC CGCATGCCGC TGGCGCTGGT GTCGACCGGC AGCGCATTCA TCCTCCTGGC CATCCTCGAT GTCGTCGACC GCAACCGCGG CAAAGTCGGC CGCCGGCGCA TTCGCATCAT GGGTGTGCAG CAGCCGCGCG AGTTCGAGCC GCGCCTGCGT CAACTGCTGG CCAAACACGC CACGGTGCGC GGTTCGAAGA TCAGCGTGCG TCGCGACGAA GTTACCGTAG ATATATATGG TGAGCGATAC ACCAGCGCGG GCGACATTCT CACTCTACTC TCCGACGCTG GGATCGAATT CCAAGGCGAC GTTTCGTGCG AAGAGATCTG A
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Protein sequence | MTNTAELIQF RHLGFENFDF VVLSVILGRL TIAALLGGII AYRPWRYFMH WYFERTESGA QVLIAVTGAL MTSVIGNNVA LAFGLVGLGG FIRFRSGIKD PREAGVMFLM IGIGMSSGIG RMPLALVSTG SAFILLAILD VVDRNRGKVG RRRIRIMGVQ QPREFEPRLR QLLAKHATVR GSKISVRRDE VTVDIYGERY TSAGDILTLL SDAGIEFQGD VSCEEI
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