Gene Hoch_5613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5613 
Symbol 
ID8548027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7707881 
End bp7708561 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content62% 
IMG OID646390284 
Producthypothetical protein 
Protein accessionYP_003269986 
Protein GI262198777 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0716122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.161209 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAATA CGGCGGAGCT GATTCAGTTT CGCCACCTCG GTTTCGAGAA CTTCGATTTC 
GTGGTTCTGT CCGTCATCCT GGGCCGCCTG ACCATCGCAG CCCTGCTCGG AGGCATCATC
GCCTACCGGC CGTGGCGCTA CTTCATGCAC TGGTATTTCG AGCGCACGGA GAGCGGGGCC
CAGGTGCTCA TCGCGGTGAC CGGCGCGCTG ATGACCAGCG TGATCGGCAA CAACGTGGCC
CTGGCCTTCG GTCTGGTCGG TCTCGGCGGC TTCATCCGCT TCCGCTCGGG CATCAAAGAT
CCGCGCGAAG CCGGCGTCAT GTTCCTGATG ATCGGCATCG GCATGTCGAG CGGTATCGGC
CGCATGCCGC TGGCGCTGGT GTCGACCGGC AGCGCATTCA TCCTCCTGGC CATCCTCGAT
GTCGTCGACC GCAACCGCGG CAAAGTCGGC CGCCGGCGCA TTCGCATCAT GGGTGTGCAG
CAGCCGCGCG AGTTCGAGCC GCGCCTGCGT CAACTGCTGG CCAAACACGC CACGGTGCGC
GGTTCGAAGA TCAGCGTGCG TCGCGACGAA GTTACCGTAG ATATATATGG TGAGCGATAC
ACCAGCGCGG GCGACATTCT CACTCTACTC TCCGACGCTG GGATCGAATT CCAAGGCGAC
GTTTCGTGCG AAGAGATCTG A
 
Protein sequence
MTNTAELIQF RHLGFENFDF VVLSVILGRL TIAALLGGII AYRPWRYFMH WYFERTESGA 
QVLIAVTGAL MTSVIGNNVA LAFGLVGLGG FIRFRSGIKD PREAGVMFLM IGIGMSSGIG
RMPLALVSTG SAFILLAILD VVDRNRGKVG RRRIRIMGVQ QPREFEPRLR QLLAKHATVR
GSKISVRRDE VTVDIYGERY TSAGDILTLL SDAGIEFQGD VSCEEI