Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_5611 |
Symbol | |
ID | 8548025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 7706657 |
End bp | 7707022 |
Gene Length | 366 bp |
Protein Length | 121 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 646390282 |
Product | Cupin 2 conserved barrel domain protein |
Protein accession | YP_003269984 |
Protein GI | 262198775 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0662] Mannose-6-phosphate isomerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.150042 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACCGT ATCGACTGGT AGAGAGCAGC ACGACCATTC CGGTGCCGGG CGGCAAGCGT ATCGAGGAGT TTTTCGGACG CGTCAACACC GAGACCGATG CCTTCAGCCT GGCGCACATG ATCGCGCCTC CGGGCTGGAC CGAGCCCGCG CAGCGCCCGA CCTTCGGCGA GCTCACCATC ATGGTGCGCG GCACCATGGA CATCGAGGTC GGCGAGGACA CCGTCACGCT GCGCGCCGGC CAGGCCTTCT GGGTCGAGCC CGATGTGCGC GTGCGCTACA GCAACAACTC GCAGGAAGAG GGCGAGTACT ACGCGGTGTG CATGCCGGCG TTCTCACCCG ATGGCGCGCG CCGCGAGCCC GAGTAG
|
Protein sequence | MKPYRLVESS TTIPVPGGKR IEEFFGRVNT ETDAFSLAHM IAPPGWTEPA QRPTFGELTI MVRGTMDIEV GEDTVTLRAG QAFWVEPDVR VRYSNNSQEE GEYYAVCMPA FSPDGARREP E
|
| |