Gene Hoch_5611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5611 
Symbol 
ID8548025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7706657 
End bp7707022 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content67% 
IMG OID646390282 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_003269984 
Protein GI262198775 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.150042 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCGT ATCGACTGGT AGAGAGCAGC ACGACCATTC CGGTGCCGGG CGGCAAGCGT 
ATCGAGGAGT TTTTCGGACG CGTCAACACC GAGACCGATG CCTTCAGCCT GGCGCACATG
ATCGCGCCTC CGGGCTGGAC CGAGCCCGCG CAGCGCCCGA CCTTCGGCGA GCTCACCATC
ATGGTGCGCG GCACCATGGA CATCGAGGTC GGCGAGGACA CCGTCACGCT GCGCGCCGGC
CAGGCCTTCT GGGTCGAGCC CGATGTGCGC GTGCGCTACA GCAACAACTC GCAGGAAGAG
GGCGAGTACT ACGCGGTGTG CATGCCGGCG TTCTCACCCG ATGGCGCGCG CCGCGAGCCC
GAGTAG
 
Protein sequence
MKPYRLVESS TTIPVPGGKR IEEFFGRVNT ETDAFSLAHM IAPPGWTEPA QRPTFGELTI 
MVRGTMDIEV GEDTVTLRAG QAFWVEPDVR VRYSNNSQEE GEYYAVCMPA FSPDGARREP
E