| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5597 |
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| Symbol | |
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| ID | 8548011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 7682424 |
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| End bp | 7683539 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646390270 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_003269972 |
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| Protein GI | 262198763 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCTGC CCATCGGAGA CGAGCCCAAC GCTCCGCGCA CGCCCGTCGT CACCTACGCG
CTGCTCGGCA TCAACATCGC CGTGTACCTG TTCATCACCC TGCCCATGGG CAGCGATTCG
GCCGAATACC AGCGTGTGGC CGAAAGCTGG GGCTACCGCG CGGCCGCGCC CTCGCCGCTC
ACCCTGCTCA GCTCGATGTT CCTCCACGCC GACATCTGGC ACCTGCTCGG CAACATGCTG
TACCTGTGGA TCTACGGCGA CAACGTCGAA CATCGCCTGG GCCCGCTCGG CTACATCGGC
GTGTACCTGG CCGGCGGCGC CGTGGCCACG CTGAGCTACG CGGCCTTTCT GTCGCCGGCG
CTGATGGAGC TGCCGCTCGT CGGTGCCTCC GGCGCCATCT CCGCGCTGCT CGGCTTCTAC
TTCGTGTGGT TCCCCAAGAA CCGCGTGCGC GTGTTCATCC TGTTTCGCGT GTGGCGCATC
CGGGCGCCCA TCGTGCTCGG CATCTACGTG CTCTGGGACA ATGTGCTGCC GCTCCTGATC
ACGGCCAGCA GCGACGGCGT GGCCTACGGC GCCCATCTCG GCGGCTTCTT CGGCGGCGTC
ATCGGCGCGC TGCTCATCAG CTTCTTCGGC GAGCGCAAAT TCCAACACGG ACACCTGTCC
GAGCAAGCGG TCAATGAGCT GCGCGAGCAC CCGCCGCAAC AGCTCGCCGC CGACGCCGCG
CCCGCGACTG CCAAGAGCGT GTCCGCGCTC GCCAGCAGCA ACCCCGAGGC CGCCATGCTG
CTCTACGAGA CGCTGAGCCC GAGCGAGCGC CAACGCGTCC CCGCCGAGCT GCTCGACGAC
ATCGCCGACG AGCTGGCCAG CCACGGCGAA CACGAGGCCG CGCAGGCGCT CTACCATCGG
GTCGCCGCCC AGCAGCCCGG CTCGCAGGCC GGCGTCCGCG CCATGCTGGC CATCGGCCAC
TACTTTCGCG ATATCGGCCA CCCCGCGCGC GCCTATCAAT ACTACTACGC CATCGCCAAA
CACGACCCGC GCTCGCCGCT GGCCGAGCAG GCGCGCCAGG CCATGCTCGA TCTCGAGCAC
CATCATCGCC GCACAAACGC GCGCCGAGCG CCCTGA
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| Protein sequence | MFLPIGDEPN APRTPVVTYA LLGINIAVYL FITLPMGSDS AEYQRVAESW GYRAAAPSPL
TLLSSMFLHA DIWHLLGNML YLWIYGDNVE HRLGPLGYIG VYLAGGAVAT LSYAAFLSPA
LMELPLVGAS GAISALLGFY FVWFPKNRVR VFILFRVWRI RAPIVLGIYV LWDNVLPLLI
TASSDGVAYG AHLGGFFGGV IGALLISFFG ERKFQHGHLS EQAVNELREH PPQQLAADAA
PATAKSVSAL ASSNPEAAML LYETLSPSER QRVPAELLDD IADELASHGE HEAAQALYHR
VAAQQPGSQA GVRAMLAIGH YFRDIGHPAR AYQYYYAIAK HDPRSPLAEQ ARQAMLDLEH
HHRRTNARRA P
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