Gene Hoch_5570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5570 
Symbol 
ID8547984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7646474 
End bp7647478 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content67% 
IMG OID646390243 
ProductGluconolactonase 
Protein accessionYP_003269945 
Protein GI262198736 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3386] Gluconolactonase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTGT TTCACCACGG ACTATCCTCT CTTCTGTTCG CTTCTCTGCT CATCCAAGGT 
GCGGGCTGCG GTGACGACGG CGGCTCGACG CCGGCCATCG ATGCCGGCGC GATCGACGCC
GAGGCTCCCG ACGCGCCGGC CATCGACGCC GGCGGCATGG ACGCCAACAC GGCCACCGAC
CCGCTCGACG GTATCGGCGC GGTCAACAAG CTCGCCGAGG GCTTCATGTT CACCGAGGGC
CCGACCTGGC GCGAGGACGT CGGCCTGCTG TTCACCGATA TCCCCAACAA CGTCATCCTG
CGACTGCTCG ACGACAACTC GACCGAGGAG TTCCGCAACC CCAGCGGGCA GGCCAACGGC
CTCATCTCCG ACAACGATGG TTTGCTGCTC GCGGCCGAGC ACGCCAACCG CCGGGTTACG
CGTACGCTTG AAAACGGTGA TATCGAGGTG GTGGCCGAGA GTTTCGAGGA CAACCGCCTC
AACTCGCCCA ACGACATCGA GGTGCGCAGC GACGGCACCA TTTACTTCTC GGATCCGCCC
TACGGCCTGC CCAACCAGGG CGACGGTCGC GAGCTGGATT TCCACGGCCT GTTCCGCGTC
GATACCGAGG GCAGCCTGAG CGCCGAGTGG CGCGGTTCGC TCGACGACCG GCCCAACGGC
GTGGTGCTCT CGCCCGATGA GGGCACGCTG TACCTGGCCG ACACCAACGC GTCCAAGGTG
CGCCGCTTCT CGGTGGCCGC CGACGGCTCG CTCACCGAGG AAACCGACCT GGTGTCCGAT
ATCCCCAACC CCGACGGCAT GGCCATCGAC GAGAACGGCA ACCTGTTCGT CACCGCGCAG
GATGGCGTTC GCGTCTACGC GCCCGACGGC ACGCTGTGGG GCACCATCGA GGTGGCCGAG
CAGCCCAGCA ACTGCGCCTT TGGCGGCGCC GATCGCAAGA CCCTGTACAT CACCGCGCGC
ACCGGTCTGT ACAGCGTGAC CCTGGCCAAT CCCGGCCAGC TCTGA
 
Protein sequence
MRLFHHGLSS LLFASLLIQG AGCGDDGGST PAIDAGAIDA EAPDAPAIDA GGMDANTATD 
PLDGIGAVNK LAEGFMFTEG PTWREDVGLL FTDIPNNVIL RLLDDNSTEE FRNPSGQANG
LISDNDGLLL AAEHANRRVT RTLENGDIEV VAESFEDNRL NSPNDIEVRS DGTIYFSDPP
YGLPNQGDGR ELDFHGLFRV DTEGSLSAEW RGSLDDRPNG VVLSPDEGTL YLADTNASKV
RRFSVAADGS LTEETDLVSD IPNPDGMAID ENGNLFVTAQ DGVRVYAPDG TLWGTIEVAE
QPSNCAFGGA DRKTLYITAR TGLYSVTLAN PGQL