Gene Hoch_5564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5564 
Symbol 
ID8547978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7637395 
End bp7638183 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content69% 
IMG OID646390237 
Producthypothetical protein 
Protein accessionYP_003269939 
Protein GI262198730 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTT CGACCCAAGA ACACATCGCC GCTCTCACCG AGAGCGCTCG CAGCCATCCC 
CTCTACGCCG AAGTGAACAA CCCAGCCGCG GTGCGCGCCT TCATGGCGCA TCACGTGGTC
TGCGTGTGGG ATTTCATGTC GCTGGTGAAG AGCCTGCAAC GCGACCTGAT CGGCTGGTCG
CTGCCCTGGC TGCCGCCGCG ATTTGCCGGC GCCGCGCGCC TGATCAACGA GATCGTGCTC
GACGAGGAGA GCGACGAGAT CGGCGATCGC CACATCAGTC ACTTCGAGCT GTACCTCGAG
GCCATGGCCG AGGCGGGCGT AGACATCGCT CCGATGTCGC GGCTCATCGA CGCCCTGCGG
CGGGGCGACG AGGTGATGGC GGCAGCCGAG CACTCCGGCC TGCCGGGCGC CGCGCTGCGT
TTCCTGCGCG CTTCGCTCGA GGTCCTCGAC ATGCCCTTGA GCGCCCGGGT CGGCGCCTTC
TACTACGGTC GCGAGCAGCT CATTCCGCAG ATGTTCACGC CGCTGCTCGC CCAGCTCGAG
AGCCGCGCGC TGCCGTGCGC GTCCCTTCGC ACCTATCTAT CGCGGCACAT CGAGAGCGAC
GGTGAGCGCC ACGGTCCGCT GTCGTTGCAA CTGCTCGAGC AGGTCTGCGG GGAAGACGCC
GACGCCTGGG CGCAGGCGCG CGGCGCCGCG GTGTTTGCCC TCGAAGCCCG GATCGCCCTC
TGGGATGCCG TGCACGCCCG CTTGCTGGCC GCCCACGATG TCGTCGAGGC CAGGCCGCAG
CGCGCCTGA
 
Protein sequence
MSTSTQEHIA ALTESARSHP LYAEVNNPAA VRAFMAHHVV CVWDFMSLVK SLQRDLIGWS 
LPWLPPRFAG AARLINEIVL DEESDEIGDR HISHFELYLE AMAEAGVDIA PMSRLIDALR
RGDEVMAAAE HSGLPGAALR FLRASLEVLD MPLSARVGAF YYGREQLIPQ MFTPLLAQLE
SRALPCASLR TYLSRHIESD GERHGPLSLQ LLEQVCGEDA DAWAQARGAA VFALEARIAL
WDAVHARLLA AHDVVEARPQ RA