| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5556 |
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| Symbol | |
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| ID | 8547970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 7624478 |
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| End bp | 7626013 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646390229 |
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| Product | amidophosphoribosyltransferase |
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| Protein accession | YP_003269931 |
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| Protein GI | 262198722 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
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| TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.564803 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACAAGC GGGGGCAGCA CTTCCTGGCA CCCTCGCGCG CATCCGACCC GGCGCGCCGT
CGGCGTATCG TCGCCAGACG CGTCAACCCT TTGCACCGTC TCGCGGCCGT GGTAAGCGTT
GCCGCCGTGT GTGGAATCTT TGGCATCTAC GGGCACGACG AAGCCGCTAA CATCGCTTAC
CTGGGGCTGC ATTCGCTGCA GCACCGCGGT CAGGAATCCG CCGGCATCGT CGCCGCGGGG
CCCAGCGGAT TGCGTCGGCA GGCGGCCATG GGATTGGTCT CCGATGCCTT CGACCGCATG
CGCCTGGGCC ACCTGCCGGG CCGCGCGGCC ATCGGTCAGG TGCGCTACTC GACCACGGGA
AACTCCGAGT TGCGCAACGC GCAGCCGTTT TTGTTCGAGT ACGCCCACGG CTCCATCGCC
ATCGCCCACA ACGGCAATCT GCTCGACTCG GCCGATCAGC GCACCGCGCT CGAGCGCGAT
GGCTCGATCT TTCAGACCTC GAGTGACACC GAGGTGATCG TCCATCTGCT GGCCCGTTCT
CGCGTCGAGA CGACCGTGGA GCGCTTGCGT TCGGCCTTGG CCCAGGTGCG CGGCGCCTAT
TCGCTGGTGG TGCTCACCGA GCGCGCGCTC ATCGCCGCGC GCGATCCCCA CGGCGTGCGG
CCCCTGTGCC TGGGTCGGCT CAAAGACGCC TACGTGCTGT CCTCGGAGAC CTCGTCCTTC
GACCTGATCG AGGCCGAGTT CATCCGCGAG CTCGAGCCCG GCGAGATGGT GGTCATCGAC
GACAGCGGCC TGCGCTCGCT GTCGGTGTCC GAGCGCGCCG CCGAGGCGCC CGAGCCGCGC
CGCTTCTGCG TGTTCGAGCA CGTCTACTTC GCGCGCCCCG ACAGCCTCGT CGACAGCCAG
TCCGTGTATC GCTGTCGCGA GAGCCTGGGG CGTCAGCTCG CGCGCGAGCA GCCGGCCGAG
GCCGACGTCG TCATCCCGGT GCCCGACTCC GGCGTGGCCG CCGCCATCGG CTTCGCGCGC
GAGGCCGGGC TCACCTATGA GATGGGCCTG ATCCGCTCGC ACTACGTGGG CCGCACCTTC
ATCGAGCCCC AGGACTCCAT CCGTCACTTC GGCGTGCGCC TCAAGCTCAG CCCGGTGCGC
TCCGTGGTCG ATGGCAAGCG CGTGGTCGTG GTCGACGACT CGCTCGTGCG CGGCACCACC
TCGCGCAAGA TCGTCAAGAT GCTGCGCGCG GCCGGCGCGC GCGAAGTGCA CCTGCGCATC
GCCGCGCCGC CGACCACCCA TCCCTGCTTC TACGGCATCG ACACCCCGAC CCGTTCGGAG
CTGATCGCGT CCTCGCATTC CCCCGCGGAA GTGGCCCGCT ACGTCACCTG CGACTCGCTC
GGCTACCTAT CGCACGCGGG CATGATGCAG GCGCTCGGCT CCGACGCCCA GGGGACCGGC
TATTGCTCGG CGTGCTTCAC GGGCGTATAT CCGATAGCCT TGAACCTCAA CCGGCCGCGC
GAGAGCGGCT CCCCGCAGGA GACATCCGAT GAGTGA
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| Protein sequence | MYKRGQHFLA PSRASDPARR RRIVARRVNP LHRLAAVVSV AAVCGIFGIY GHDEAANIAY
LGLHSLQHRG QESAGIVAAG PSGLRRQAAM GLVSDAFDRM RLGHLPGRAA IGQVRYSTTG
NSELRNAQPF LFEYAHGSIA IAHNGNLLDS ADQRTALERD GSIFQTSSDT EVIVHLLARS
RVETTVERLR SALAQVRGAY SLVVLTERAL IAARDPHGVR PLCLGRLKDA YVLSSETSSF
DLIEAEFIRE LEPGEMVVID DSGLRSLSVS ERAAEAPEPR RFCVFEHVYF ARPDSLVDSQ
SVYRCRESLG RQLAREQPAE ADVVIPVPDS GVAAAIGFAR EAGLTYEMGL IRSHYVGRTF
IEPQDSIRHF GVRLKLSPVR SVVDGKRVVV VDDSLVRGTT SRKIVKMLRA AGAREVHLRI
AAPPTTHPCF YGIDTPTRSE LIASSHSPAE VARYVTCDSL GYLSHAGMMQ ALGSDAQGTG
YCSACFTGVY PIALNLNRPR ESGSPQETSD E
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