| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5555 |
|---|
| Symbol | |
|---|
| ID | 8547969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 7623348 |
|---|
| End bp | 7624485 |
|---|
| Gene Length | 1138 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 646390228 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003269930 |
|---|
| Protein GI | 262198721 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1186] Protein chain release factor B |
|---|
| TIGRFAM ID | [TIGR00020] peptide chain release factor 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.12714 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGACG GCACTGTGAG CTACGCAGAC ATCGACCGCA AAGCCATCCG CGGCCTCTTC
AAGGAGCTCG AGAACACCCT CGAAGAGCTC CGGGGGCATC TTTGACGTCG ACGAAAAACG
CCTCCGAATT GAAGAATTAG AGTCCATCTC GGCCGATCCG GCGTTCTGGG ACAACCGCCA
GAAAGCCGAG GACAGCCTGC GCGAGCTCAA GTCCATCAAG GACGTGGTCG GCTCCTACGA
CAAGCTGAGC AGCAAGCTGG CGGACGCCGT GGTGTTGCTC GAGCTGGCCG AGGACGCCGA
AGACGCCGAG TCGGCCATTG AGGCGCGCAC CGCAGCCGAG GAGATCGAGC GTTCGCTCGA
CGAGCTCGAG TTTCGGCGCA TGCTCTCGGG CGAGTACGAC CAGGGCGGCG CGGTCTTGCA
GATCAACTCC GGCGCTGGCG GCGTCGACGC CGCGGACTGG GCGCAGATGC TGTTGCGCAT
GATCCTGCGC TACGCCGACC ACAAAGGCTG GAAAGCCGAG GTGCTCGACG AGCAGGCGGC
CGAAGAGGCC GGCATCAAGA GCGCCACCTT GGTGATCACG GGCGAGTACG CCTATGGCCT
GCTCAAGGCC GAGATGGGCG TGCATCGGCT GGTGCGCATC TCGCCCTTCG ACGCCCAGGC
CCGGCGTCAG ACCTCGTTCG CCGCGGTCAC GGTGTCGCCC GACATCGACG ACTCGGTGCA
CGTGGACATC GACGAGGGCG AGCTGCGCAT CGATGTGTAT CGCGCGGGCG GTGCCGGCGG
CCAGCACGTC AACAAGACCG AGAGCGCCGT GCGCATCACG CACTTGCCCT CGGGCATCGT
GGTGCAGTGT CAGAACGAGC GCTCGCAGCA CAAGAACAAG GCCTCCGCAA TGCGCGTGCT
GCGCTCGCGC CTCTACGACT ATCTCAAGGC CGAGCGCGAC GCAGCCGCGG CCGAGGCTGC
GCCTGAGAAG AAGAAGATCG AGTGGGGCTC GCAGATTCGC TCGTACGTGC TCGCGCCCTA
CCGCCAGGTC ACCGATCATC GCACCGACCT CAAAGTCGGC AACGTGGACG CGGTGCTCGA
CGGCGATCTC GATCCCTTCA TTCGGACGTA CCTACTCAGC GAAGGCGCCA ACGCCTGA
|
|---|
| Protein sequence | MSDGTVSYAD IDRKAIRGLF KELENTLEEL GGIFDVDEKR LRIEELESIS ADPAFWDNRQ
KAEDSLRELK SIKDVVGSYD KLSSKLADAV VLLELAEDAE DAESAIEART AAEEIERSLD
ELEFRRMLSG EYDQGGAVLQ INSGAGGVDA ADWAQMLLRM ILRYADHKGW KAEVLDEQAA
EEAGIKSATL VITGEYAYGL LKAEMGVHRL VRISPFDAQA RRQTSFAAVT VSPDIDDSVH
VDIDEGELRI DVYRAGGAGG QHVNKTESAV RITHLPSGIV VQCQNERSQH KNKASAMRVL
RSRLYDYLKA ERDAAAAEAA PEKKKIEWGS QIRSYVLAPY RQVTDHRTDL KVGNVDAVLD
GDLDPFIRTY LLSEGANA
|
|---|
| |