Gene Hoch_5550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5550 
Symbol 
ID8547964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7618139 
End bp7619035 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content70% 
IMG OID646390224 
ProductUTP-glucose-1-phosphate uridylyltransferase 
Protein accessionYP_003269926 
Protein GI262198717 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1210] UDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01099] UTP-glucose-1-phosphate uridylyltransferase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.719818 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCTT CCCGACCTCC CATTCGCAAG GCCGTGATCC CGGCCGCCGG CCTGGGCACG 
CGCTTTCTGC CCGCCACCAA GGCCATCCCC AAAGAGATGT TGCCCATCGT CGACAAGCCG
ACGATCCAGC TCGTCGTCGA GGAGGCGGTG GCTGCCGGGA TGGAGGACAT CGTGATCATC
AACGGCCGCC AGAAGGTGGC CATCGAGGAT CATTTCGACC ACGCCTTCGA GCTCGAGCAC
ACGCTGCGCG AGCGCAGCAA GGACGAGCTC TTGGCGCTGT CCGAGCAGGT GTCGACGATG
GTGCGCATGG TCTCGGTGCG GCAGAAGCGG CCGCTGGGCC TGGGCCACGC GGTGCTGTGC
GCGCGTCCGG CCGTGGGCGA GGAGCCCTTC GCCGTGCTGC TCGGCGACGA TCTCATCGAC
TGCGATGAGG CCCCCGGTAT CGGCCAGCTC GCCGAGGTCT ACGCGCGCAC GGGCGCCGGC
GCCGTGGCCG TGATGGAGGT GCAGCCGGGC GAGGAGAAGC TCTACGGCAT CCTCGACGCC
GAGCCCATGG AAGACGGCCT GCTGCGCGTG CGCGACATGG TCGAGAAACC CGATCCCAAG
GACGCGCCCT CGCGCATGGC CGTGATCGGA CGCTACGTCC TGCCGCCCGA GATCTGGCCC
ATCCTGGCCG AGGTCAAGCC CGGCGTCGGC GGCGAGATCC AGCTCACCGA CGCGCTGCGC
GAGCTGGCCC GCGGCGACGG CCCCGGCCTC ATCGGTGTGC CCATCCGCGG CACCCGCCAC
GACGCCGGCA ACAAGCTCGG CTACCTGGGC GCCAACCTGG CCTACGCGCT CAAGCGGCCC
GAGCTGCGCG ACGACGTGCT GGCGCTGATG CGCTCCCTGC TCGACGCCGA GAAGTAG
 
Protein sequence
MSPSRPPIRK AVIPAAGLGT RFLPATKAIP KEMLPIVDKP TIQLVVEEAV AAGMEDIVII 
NGRQKVAIED HFDHAFELEH TLRERSKDEL LALSEQVSTM VRMVSVRQKR PLGLGHAVLC
ARPAVGEEPF AVLLGDDLID CDEAPGIGQL AEVYARTGAG AVAVMEVQPG EEKLYGILDA
EPMEDGLLRV RDMVEKPDPK DAPSRMAVIG RYVLPPEIWP ILAEVKPGVG GEIQLTDALR
ELARGDGPGL IGVPIRGTRH DAGNKLGYLG ANLAYALKRP ELRDDVLALM RSLLDAEK