| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5542 |
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| Symbol | |
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| ID | 8547956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 7603004 |
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| End bp | 7604446 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646390216 |
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| Product | Ste24 endopeptidase |
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| Protein accession | YP_003269918 |
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| Protein GI | 262198709 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0501] Zn-dependent protease with chaperone function |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.500155 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCACCT ATCTCCGTTT TTGCCTCTGG CTTTGCTTTT CGCTGTCCGC GCTGCTCTCG
GCGCCAACCC TGGCGCTAGC CGCGCAGGAC GCCGCAGACG CGCCCGCGGC TGCATCGACA
GACGCGGCCG CATCGACAGA TACGGCCGCA TCGGCAGACG CGGCCGAGCC GGTGACGCTC
GAGATCCCGC CCGGGGCCGA GGCCGGTCCC GACTTCGACG TCGAGCGCGC GACCCAGGCG
TATCTCGACC TGTTGTCCGC CGAAGATCGC GAGCGCTCCG ACGCCTACTT CGAGGGCGGC
TATCTGCTCC TGGTGATCAA CTTCGCGCTC GGTCTGGTGA TCGCGTGGCT GCTGTTGCGG
ACGCGGCTAT CGGCGCGCAT GCGCGACGCG GCCGAGCGCC TGGCCCGCGG CCACCGCACC
GCCACCGTGG CGCTCTACGG CGTGCAGTAC GTGGTGCTCA GCTCGTTGTT GAGCCTGCCC
TTTGCCGTGT ACACCGGCTT CTTCCGCGAG CACGCCTACG GCCTCTCGAC CCAGACCTTC
GGCGCCTGGG CCGGCGATGC CTTCAAGAGC CTGATCATCG GCGCGGTCTT CGGCGCGATC
GGGCTCGCGC TGCTGTACGC CGTGATCCGG CGCTTTCCGC GCACCTGGTG GCTGGGCGGC
GCGCTCACCG GCGTGGCCCT GATCGTGCTG TCGCTGCTGG TGGCGCCGCT GTGGCTGGCG
CCGCTGTTCA ACGACTACAA GCCCTTGCCC GAGGGCCCGG TGCGCAGCTC GATCTTGGCC
ATGGCCGAGG CCCACGATGT CCCCGCGGAT AACGTCTACT GGTTCGATGC CTCGCGCCAG
AGCACGCGCA TCAGCGCCAA CGTCACCGGC TTGTTTGGCA CCATGCGCAT CAGCCTCAAC
GACAACCTGC TCGAGCGCAC CTCGCCCGAG GAGATCGAGG CGGTCATGGG TCACGAGCTG
GGTCATTACG TCGAGGGCCA CATGTGGCGG GCCATGCTGG TGCTGGGTCT GCTGCTGATG
CTCGGGCTGG CGCTCGGACG CCTGGCCTAC GAGCGTCTGC TGGCGAGCCG CGGCGAGCGC
TGGGGGCTGC GCGGCCCCGC GGATCCGGCG GCGTTTCCGC TGCTGAGCGC GATCATCTCG
GTGTACTTCT TCCTGGCCAC GCCGGTGACC AACACGCTCA CGCGCACCTC CGAAGTCGAC
GCCGATCGTT TTGGTCTCGA TGCTGCGCGC CAGCCCGACG GCTTCGCGCG CGTGGCCATG
CGCCTGTCCG ATTACCGCAA GATCGACCCC GGTCCGCTCG AGGAGTTCTG GTTTTTCGAC
CATCCCAGCG GCCGCGCCCG CGTCGAGATG GCCATGCGCT GGAAAGCCGA GCAGCTCGCG
CGCGCCAAGA ATTCGGACAG CGCGACCAAG AACGGCGACG ACGCTGCCGC TGCTGGCGAG
TAG
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| Protein sequence | MRTYLRFCLW LCFSLSALLS APTLALAAQD AADAPAAAST DAAASTDTAA SADAAEPVTL
EIPPGAEAGP DFDVERATQA YLDLLSAEDR ERSDAYFEGG YLLLVINFAL GLVIAWLLLR
TRLSARMRDA AERLARGHRT ATVALYGVQY VVLSSLLSLP FAVYTGFFRE HAYGLSTQTF
GAWAGDAFKS LIIGAVFGAI GLALLYAVIR RFPRTWWLGG ALTGVALIVL SLLVAPLWLA
PLFNDYKPLP EGPVRSSILA MAEAHDVPAD NVYWFDASRQ STRISANVTG LFGTMRISLN
DNLLERTSPE EIEAVMGHEL GHYVEGHMWR AMLVLGLLLM LGLALGRLAY ERLLASRGER
WGLRGPADPA AFPLLSAIIS VYFFLATPVT NTLTRTSEVD ADRFGLDAAR QPDGFARVAM
RLSDYRKIDP GPLEEFWFFD HPSGRARVEM AMRWKAEQLA RAKNSDSATK NGDDAAAAGE
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