| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5541 |
|---|
| Symbol | |
|---|
| ID | 8547955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 7601603 |
|---|
| End bp | 7602676 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 646390215 |
|---|
| Product | Appr-1-p processing domain protein |
|---|
| Protein accession | YP_003269917 |
|---|
| Protein GI | 262198708 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0616045 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGGTGGG CGTTCACACT CTCCAACGCC GGTGCCTACT ATTTCGCCGA AGATTGTGAA
GCGATCGTCA ACACGGTCAA CTGTGTCGGC GTCATGGGTC GAGGCATCGC ATTGCAGTTC
AAGAAGGCCT ACCCTGAAAA TTTCAAGGTC TACGCCGCTG CCTGCAAGCG AAAGGAAGTC
CAGCCGGGCC AGATGCTGGT GTTCAGGACG GGGCGATTGA TGAACCCACG GTACATCATC
AACTTTCCAA CCAAGCGACA CTGGCGCGGT AAGAGTAGAA TAGAGGATAT CGAGTCGGGT
CTTGTAGCAT TGGCCGATGT GCTCGGCGCT TGTAGAATAA GGTCGATCGC TATCCCGCCG
CTTGGGGCAG GCTTGGGCGG CCTTGACTGG ATGCAGGTTC GTGAGCGGAT CGAAGCAGCT
TTAGGCGGCT TGGAAGATGT CCAGATCGTG GTCTTCGAGC CGCGAGCGGC AACTGCGAGC
GAACGACCGA ACCGTTCTCG CGAGGTGCCC GGGATGACGC CAGGACGTGC GGCGCTGCTC
ATGCTGATAG ATCGGTATCT CGCCGGACTA CTCGATCCCT CCGTGACCCT ATTGGAACTC
CACAAGTTAA TGTACTTTCT TCAAGAAGCG GGAGAACCGC TCAAGCTTAA GTACCAAAAA
GCCCACTATG GGCCCTATGC CGAGAACCTT CGGCACGTGC TTCATGCGAT CGAGGGGCAC
ATGGTGTCGG GCTACGCGGA TGGTGGCGAC GCTCCCGACA AACAACTCGA ACTCGTTCCT
AAGGCTCTTC GCGATGCTGA GACCTTCTTG AAGAGCAAGG AGACGACGCG ATCGCACATG
CAGAGGGTCT TCGAACTCGT GGACGGTTTT GAGTCGCCGT TCGGGCTGGA GTTGCTGACG
ACCGTGCACT GGGTGGCAAC CAGGGAGCGG CCGCAGTCCG CGGACGAGGT CGTCTCGGCG
ATCCACGGCT GGAACGCTCG CAAGATGCAG TTCTCCAGAC GCCAGATTCT GCTCGCGCTC
GACGTTCTCT CGCGCAAAGG CTGGTACACA CCGGCGTGGG AGGCGAACGC ATGA
|
|---|
| Protein sequence | MRWAFTLSNA GAYYFAEDCE AIVNTVNCVG VMGRGIALQF KKAYPENFKV YAAACKRKEV
QPGQMLVFRT GRLMNPRYII NFPTKRHWRG KSRIEDIESG LVALADVLGA CRIRSIAIPP
LGAGLGGLDW MQVRERIEAA LGGLEDVQIV VFEPRAATAS ERPNRSREVP GMTPGRAALL
MLIDRYLAGL LDPSVTLLEL HKLMYFLQEA GEPLKLKYQK AHYGPYAENL RHVLHAIEGH
MVSGYADGGD APDKQLELVP KALRDAETFL KSKETTRSHM QRVFELVDGF ESPFGLELLT
TVHWVATRER PQSADEVVSA IHGWNARKMQ FSRRQILLAL DVLSRKGWYT PAWEANA
|
|---|
| |