Gene Hoch_5502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5502 
Symbol 
ID8547915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7547599 
End bp7548003 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content67% 
IMG OID646390175 
ProductNUDIX hydrolase 
Protein accessionYP_003269878 
Protein GI262198669 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID[TIGR00586] mutator mutT protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.985254 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAAAG AGGTCATTCG AGTCGTCGCG GCCGTCATCG AGCGCGGGGG TCGCTATTTG 
ATCACCCAGC GGAAGAGCAC CGCGGTGCTG CCGCTGCTCT GGGAGTTTCC CGGCGGGCGC
GTCGAGAGCG GCGAAGGCGA CGAGGACGCG CTCAAACGCG AGATCCGCGA GCGCATCGGC
GTGGACATCG CGATCACGGG CAAGCTGGGC GAGCATCACC ACGCCTACCC GCACTACGAC
GTGCACATGA CGATGTTCTC GTGTCAGCTC GAGGGCGACG AGGAGCCCCA GGCGGCCAAC
GTCAACGACC TGCGCTGGGT GAGCTCGGCC GAGCTGCGCG ACTACGAGTT CCCGCCGGCC
GACGAGACCA CCATGAACCG CCTGCTCGGG CGCGACGCCA ACTGA
 
Protein sequence
MGKEVIRVVA AVIERGGRYL ITQRKSTAVL PLLWEFPGGR VESGEGDEDA LKREIRERIG 
VDIAITGKLG EHHHAYPHYD VHMTMFSCQL EGDEEPQAAN VNDLRWVSSA ELRDYEFPPA
DETTMNRLLG RDAN