Gene Hoch_5488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5488 
Symbol 
ID8547901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7530137 
End bp7531459 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content71% 
IMG OID646390161 
Productcytochrome P450 
Protein accessionYP_003269864 
Protein GI262198655 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2124] Cytochrome P450 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.251072 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.124542 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTC TGCCGCCCGG CCCGTCCGGC AAACTCCGCC CCACCTACCG CTTGCTGACC 
AAACCGCGGA CCGCGATCCC GGCCTGGTCC GCGCGCTACG GCGATCCCTT CACCCTCAAG
AGCCTCACCG GCCACGTCGT GGTCACCGGC AACCCAGAGG GCAACCGCGC CATCTTCAGC
GCCGACCCCG ACACCTTCGA CACCTTCGCG GCCAACGCGC TCGAGCCCTT TGTCGGCCAG
TACTCGATGC TGCTGCTCTC GGGCGAGGTC CACCGCCGCC ACCGCAAGCT GCTCATGCCG
CCCTTTCACG GCGAGCGCAT GCGCGCCTAC GCCGCCGTCA TGGCCGAGGT CGCCCGCCGC
AAGCTGCGCG AGGCCGGCGC GGGCCCGGTG CGCGCCATCG AAGTCGCCCA GGAGATCTCG
ATCGACGTCA TCGTGCGCGC GATCTTCGGC ATCCACGACG ACGATCGCGC GGCCGAGCTG
TGCGACGCCG TGCGCCGCGC CATGGGCGCC CTGCACCCGG CGCTCGCGTT CATGCCCTTC
CTGCAGCGGC GTTTCGGCGG CATCGGCCCC TACGCGCGCA TGCGCAGGTA TCTCGACTAC
AGCGACAGCC TGGTGGCAGA GCAGATGAAG CGCGCGCGCA CGCAGCCGGG CGACGACATC
CTCAGCCTGA TGCTCGCCGC CCGCGACGAC GAGGGTCAGC CCATGAGCGA GGTCGAGATT
CTCGACGAGC TGCGCACCCT GGTGTTCGCC GGCCACGAGA CCACGGCGCT GCTGCTGGCC
TGGGGCATCG ACTTCATCCA CCGCCACCCG GCCGTGCTCA AGCGCCTGCT GGCGGAAATC
GACCAGGTGG ACGACAGCGC CGACGACGCC GCCGAGCGCT ACGCTCAGCT CCCCTACCTC
GACGCCGTGT GCAAGGAGAC CCTGCGCCTG CAGCCGCCCG TGCTCGAGGT CCTGCGCACC
CTGCGCGTGC CCTTCGAGCT GTGCGGCTAC ACCGTCCCGC CCGGCATGGG CGTGGCCGCC
TCGGTGCAGC TCACCCACAG CCGCCCCGAC CTCTACCCCG AGCCCGAGGC CTTCCGCCCC
GAGCGCTTCC TCGAGCGCAA ATTCTCGCCC TTCGAGTACT TCCCCTTCGG CGGCGGCAAC
CGCCGCTGCA TCGGCGCCGC CTTCTCCTCC TTTGAAGCCA AGGTCGTGCT CGCCACGCTG
CTCGCCAACT GGCAGGTGCG CCTGCTCGAC CCGGAGCCGC CCGTGCCCGT GCGCGCCAGC
GTGGTCATCA CGCCCAAGGG CGGCGTGCCC ATCGAACTCA CATCCCGCCA GCGCCCCAAC
TGA
 
Protein sequence
MSTLPPGPSG KLRPTYRLLT KPRTAIPAWS ARYGDPFTLK SLTGHVVVTG NPEGNRAIFS 
ADPDTFDTFA ANALEPFVGQ YSMLLLSGEV HRRHRKLLMP PFHGERMRAY AAVMAEVARR
KLREAGAGPV RAIEVAQEIS IDVIVRAIFG IHDDDRAAEL CDAVRRAMGA LHPALAFMPF
LQRRFGGIGP YARMRRYLDY SDSLVAEQMK RARTQPGDDI LSLMLAARDD EGQPMSEVEI
LDELRTLVFA GHETTALLLA WGIDFIHRHP AVLKRLLAEI DQVDDSADDA AERYAQLPYL
DAVCKETLRL QPPVLEVLRT LRVPFELCGY TVPPGMGVAA SVQLTHSRPD LYPEPEAFRP
ERFLERKFSP FEYFPFGGGN RRCIGAAFSS FEAKVVLATL LANWQVRLLD PEPPVPVRAS
VVITPKGGVP IELTSRQRPN