Gene Hoch_5480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5480 
Symbol 
ID8547893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7520347 
End bp7521261 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content74% 
IMG OID646390153 
Productprotein of unknown function DUF214 
Protein accessionYP_003269856 
Protein GI262198647 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG2177] Cell division protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.142715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.559065 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAGGC TTTGGGCGTT GAGGTACACC CTGCGGCGCG CACTGGCGGG ACTGTCCCGT 
GCGCCCGGCG TGGCGGCGGC CGTGATCGTC GCCGTGGCGC TCGGCATGCT GCTGGTCGGC
GTGGTCCACC TGGTCGCGCA CAACATCGAG CTGATGGCCC ATAACTGGGG CGGCGGCGCG
CACATGGTCG TGTACCTCGA AGAGGGCGTG ACCCGCGCCG ACGTCGGCGA GCTGCGCGGC
GCGCTGGCCG AGCTGCCCGC GGTCGAGCGC ACCAGCTACG TGAGCCCGGC GCAGGCCCTC
GAGAGGCTGC GCCGCTCGCT CGGGGAACAT CAGGATCTCG ACCTCCTGCT CGAAGACCAG
CTCGGCGCCG CCCTGGTGCC GGCCTCGATC GAGGTGACCT TTGCCGCCGG CGTCGGCGAC
GTGGCCCGCA GCCACTCGCT GGTGACCCGC GTCGAGGCCG CCGTCGGCGT CGAGGATGTG
GTCTTCGTCG GCGACTGGAC CGAGCGCATG AGCGCGCTCC TGGCCACCCT GCGCGTGGGC
GCCTGGGGCT TCTTCGCGCT GGTCGCGCTG GCCTGCCTGT TCGTGGTCAC CGCGACCATG
CGGCTGCGCG CCCGCAGCCA CCGCGACGAG GCCGAGGTGC TCGAACTGTT CGGCGCCTCG
AGCGCGTTCG TGCGCGGTCC GCTGCTCATC GAGGGCATGC TCCAGGGCCT GCTCGGCGCC
GCCGCGGCCA TGATCGCGCT GTGGCTGGTG TTCGACAGCG GCGCGGGCGC GGTGCGCGCC
AGCCTGGTCG ACGTGCTCGG CACCGCCCAC GTCGCCTTTC TGCCGCCGGT GCACGTGCTC
GGCTTCGTGC TCGCCGGCGC CGCTCTCGGC CTGGCCGGCA GCCTGCTGGT GAGCGGTGGC
GAGCGCCATG CGTGA
 
Protein sequence
MPRLWALRYT LRRALAGLSR APGVAAAVIV AVALGMLLVG VVHLVAHNIE LMAHNWGGGA 
HMVVYLEEGV TRADVGELRG ALAELPAVER TSYVSPAQAL ERLRRSLGEH QDLDLLLEDQ
LGAALVPASI EVTFAAGVGD VARSHSLVTR VEAAVGVEDV VFVGDWTERM SALLATLRVG
AWGFFALVAL ACLFVVTATM RLRARSHRDE AEVLELFGAS SAFVRGPLLI EGMLQGLLGA
AAAMIALWLV FDSGAGAVRA SLVDVLGTAH VAFLPPVHVL GFVLAGAALG LAGSLLVSGG
ERHA