Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_5477 |
Symbol | |
ID | 8547890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 7515081 |
End bp | 7516994 |
Gene Length | 1914 bp |
Protein Length | 637 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 646390150 |
Product | OmpA/MotB domain protein |
Protein accession | YP_003269853 |
Protein GI | 262198644 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.650705 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.203536 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCACGC ATCGCTACGC ACTCGCAGCT CTGGTCTTTC TGGTCTCGGG GCTCGCCATC ACGCACGCGC CAGCATCGGC GCAGGCGCAA GAACAAGCCG CGCAGGGCCC CGACGGGGCC AACATCCACC TCAACGCGTT CCGGCCGGCG CTCGATTCGC GCGGCTACAT CACGGTCAAC GCCTCGCAGG TGCTCGGGCA CAACGAGGTC TCGTTTGGTC TGGTGCTCAA CTGGAGCCGC AGCCTGCTGG TGTTCGAGGA CGGCGAGAAC GTCTACTCGG TCGACAACAT CATCACGCCC ACGCTGGTCG GCGCCTACGG CTTGAAGCTG GGCCCCGCCG AGCTCGAGTT CGGCGCCAGC CTGCCCTTCA CCATCATGAG CGGTGACCGC GAGCCCGACG ATCTGGGCTC GCCCGACAAC GCCAACGACA ACGAGAACTT CCGCTTCGAC GGCCAGGGTA TCGGCGATGT CGGCCTGCAC CTCAAGACCC GCTTCCTCAA CACCTCGCGC GGTCTGCGCG TCGGCCTGGC CGTGATCGCG TCGGTGTACC TGGACACCGC CTCGGAGAAG AACAAGTGGC TCGGCGCCGC CGCGCCCGTG CCCCAGCTCA TGGGCGTGCT CGACAAAGAG TTCGGGCGTC AGGGTCGCTT TCGGGTCGCG CTGACCGGCG GCGTTCGCCT GCGCACCAAA GAGGTGATCT TCACCGACAA CCTCGACGAC ACCAGCGATG TGACCGCGCC GCGGCCGTTC ACCAATAAGA CCATCAGCGC CGGCGTCGGC GTGCCCTTTG GCGTCGGCAT CTCGTACGCG CTGTCGCCCC AGGTCTTCGA CTTCGTCGGC GAGGTCTACG GCGAGATGCC GCTCGATGGC GAGGACGCCT ATTTCCCGGT GGACGCGCTC GCCGGCATCA AAGTCTACCT GGCGCGCAAC TCGTTCCTCA GCCTGGGCGC CGGCATGGGC ATGATCATGG GCGACGGTGC CCAGCCCGAT CTGCGCGCCT TTGGCGGCAT CGTGTTCGAG CCCAACATCG GCGACCGCGA CGGCGACGGC ATCAAGGACG ACGTCGATCA GTGCCCGGCC GAGCCCGAGG ATCGCGACAG CTTCGAGGAC GAGGACGGCT GCCCCGAGCT CGACAACGAC GGCGACGGCA TCCCCGACGA GGACGACGCC TGTCCCGAGC AGCCCGAGGA CTTCGACGGC TGGGAGGATG ACGACGGCTG CCCCGATCAG AACGACTTCG ACCGCGACGG CGACGGCATC CTCGACGACG ACGACCAGTG CCCGGACGAG CCCGAGGACA AGGACGGCTT CGAAGACGAA GACGGCTGCC CCGATCCGGA CAACGACGGC GACGGCATCC TCGATGTCGA CGACCTGTGC CTCAACGACC CCGAGGATTT CGACAACTTC GAGGACGAGG ACGGCTGCCC CGACCACGAC AACGACCGCG ACCGCATCCT CGACGAGGAT GATCAATGCC CGCTCGAGCC CGAGACCTAC AACGGCAACC GCGACGATGA CGGCTGTCCC GACAGCGGCC GCGTGGTGGT CACCGACGTG AGCATCGACA TCCTCGACAA GGTGTACTTC GAGTTCAACA GCGCCAACAT CAAGCGCGAG TCGTTCCCCA TCCTCGACGC CGTCGCGGCG ACGATCATGG GCAACCCCGA CATCCGCCTG ATCGAGGTTC AGGGCCACAC CGACGCCCGC GGCAGCGCTT CCTACAACCT GCGACTGTCG GACGAGCGCG CCAAGTCGGT GCGCGCGTAC TTGCTCAAAA AGGGCGTAGA GCCCGATCGC GTGGACGCCA AGGGCTACGG CGAGACCAAG CCGATCGACT CCTCGAACAC CGAGAAGGCC CACGCCACCA ACCGCCGCGT CGAGTTCCTG ATCATGAATC GCTCGATCGA TTGA
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Protein sequence | MITHRYALAA LVFLVSGLAI THAPASAQAQ EQAAQGPDGA NIHLNAFRPA LDSRGYITVN ASQVLGHNEV SFGLVLNWSR SLLVFEDGEN VYSVDNIITP TLVGAYGLKL GPAELEFGAS LPFTIMSGDR EPDDLGSPDN ANDNENFRFD GQGIGDVGLH LKTRFLNTSR GLRVGLAVIA SVYLDTASEK NKWLGAAAPV PQLMGVLDKE FGRQGRFRVA LTGGVRLRTK EVIFTDNLDD TSDVTAPRPF TNKTISAGVG VPFGVGISYA LSPQVFDFVG EVYGEMPLDG EDAYFPVDAL AGIKVYLARN SFLSLGAGMG MIMGDGAQPD LRAFGGIVFE PNIGDRDGDG IKDDVDQCPA EPEDRDSFED EDGCPELDND GDGIPDEDDA CPEQPEDFDG WEDDDGCPDQ NDFDRDGDGI LDDDDQCPDE PEDKDGFEDE DGCPDPDNDG DGILDVDDLC LNDPEDFDNF EDEDGCPDHD NDRDRILDED DQCPLEPETY NGNRDDDGCP DSGRVVVTDV SIDILDKVYF EFNSANIKRE SFPILDAVAA TIMGNPDIRL IEVQGHTDAR GSASYNLRLS DERAKSVRAY LLKKGVEPDR VDAKGYGETK PIDSSNTEKA HATNRRVEFL IMNRSID
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