Gene Hoch_5477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5477 
Symbol 
ID8547890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7515081 
End bp7516994 
Gene Length1914 bp 
Protein Length637 aa 
Translation table11 
GC content66% 
IMG OID646390150 
ProductOmpA/MotB domain protein 
Protein accessionYP_003269853 
Protein GI262198644 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.650705 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.203536 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACGC ATCGCTACGC ACTCGCAGCT CTGGTCTTTC TGGTCTCGGG GCTCGCCATC 
ACGCACGCGC CAGCATCGGC GCAGGCGCAA GAACAAGCCG CGCAGGGCCC CGACGGGGCC
AACATCCACC TCAACGCGTT CCGGCCGGCG CTCGATTCGC GCGGCTACAT CACGGTCAAC
GCCTCGCAGG TGCTCGGGCA CAACGAGGTC TCGTTTGGTC TGGTGCTCAA CTGGAGCCGC
AGCCTGCTGG TGTTCGAGGA CGGCGAGAAC GTCTACTCGG TCGACAACAT CATCACGCCC
ACGCTGGTCG GCGCCTACGG CTTGAAGCTG GGCCCCGCCG AGCTCGAGTT CGGCGCCAGC
CTGCCCTTCA CCATCATGAG CGGTGACCGC GAGCCCGACG ATCTGGGCTC GCCCGACAAC
GCCAACGACA ACGAGAACTT CCGCTTCGAC GGCCAGGGTA TCGGCGATGT CGGCCTGCAC
CTCAAGACCC GCTTCCTCAA CACCTCGCGC GGTCTGCGCG TCGGCCTGGC CGTGATCGCG
TCGGTGTACC TGGACACCGC CTCGGAGAAG AACAAGTGGC TCGGCGCCGC CGCGCCCGTG
CCCCAGCTCA TGGGCGTGCT CGACAAAGAG TTCGGGCGTC AGGGTCGCTT TCGGGTCGCG
CTGACCGGCG GCGTTCGCCT GCGCACCAAA GAGGTGATCT TCACCGACAA CCTCGACGAC
ACCAGCGATG TGACCGCGCC GCGGCCGTTC ACCAATAAGA CCATCAGCGC CGGCGTCGGC
GTGCCCTTTG GCGTCGGCAT CTCGTACGCG CTGTCGCCCC AGGTCTTCGA CTTCGTCGGC
GAGGTCTACG GCGAGATGCC GCTCGATGGC GAGGACGCCT ATTTCCCGGT GGACGCGCTC
GCCGGCATCA AAGTCTACCT GGCGCGCAAC TCGTTCCTCA GCCTGGGCGC CGGCATGGGC
ATGATCATGG GCGACGGTGC CCAGCCCGAT CTGCGCGCCT TTGGCGGCAT CGTGTTCGAG
CCCAACATCG GCGACCGCGA CGGCGACGGC ATCAAGGACG ACGTCGATCA GTGCCCGGCC
GAGCCCGAGG ATCGCGACAG CTTCGAGGAC GAGGACGGCT GCCCCGAGCT CGACAACGAC
GGCGACGGCA TCCCCGACGA GGACGACGCC TGTCCCGAGC AGCCCGAGGA CTTCGACGGC
TGGGAGGATG ACGACGGCTG CCCCGATCAG AACGACTTCG ACCGCGACGG CGACGGCATC
CTCGACGACG ACGACCAGTG CCCGGACGAG CCCGAGGACA AGGACGGCTT CGAAGACGAA
GACGGCTGCC CCGATCCGGA CAACGACGGC GACGGCATCC TCGATGTCGA CGACCTGTGC
CTCAACGACC CCGAGGATTT CGACAACTTC GAGGACGAGG ACGGCTGCCC CGACCACGAC
AACGACCGCG ACCGCATCCT CGACGAGGAT GATCAATGCC CGCTCGAGCC CGAGACCTAC
AACGGCAACC GCGACGATGA CGGCTGTCCC GACAGCGGCC GCGTGGTGGT CACCGACGTG
AGCATCGACA TCCTCGACAA GGTGTACTTC GAGTTCAACA GCGCCAACAT CAAGCGCGAG
TCGTTCCCCA TCCTCGACGC CGTCGCGGCG ACGATCATGG GCAACCCCGA CATCCGCCTG
ATCGAGGTTC AGGGCCACAC CGACGCCCGC GGCAGCGCTT CCTACAACCT GCGACTGTCG
GACGAGCGCG CCAAGTCGGT GCGCGCGTAC TTGCTCAAAA AGGGCGTAGA GCCCGATCGC
GTGGACGCCA AGGGCTACGG CGAGACCAAG CCGATCGACT CCTCGAACAC CGAGAAGGCC
CACGCCACCA ACCGCCGCGT CGAGTTCCTG ATCATGAATC GCTCGATCGA TTGA
 
Protein sequence
MITHRYALAA LVFLVSGLAI THAPASAQAQ EQAAQGPDGA NIHLNAFRPA LDSRGYITVN 
ASQVLGHNEV SFGLVLNWSR SLLVFEDGEN VYSVDNIITP TLVGAYGLKL GPAELEFGAS
LPFTIMSGDR EPDDLGSPDN ANDNENFRFD GQGIGDVGLH LKTRFLNTSR GLRVGLAVIA
SVYLDTASEK NKWLGAAAPV PQLMGVLDKE FGRQGRFRVA LTGGVRLRTK EVIFTDNLDD
TSDVTAPRPF TNKTISAGVG VPFGVGISYA LSPQVFDFVG EVYGEMPLDG EDAYFPVDAL
AGIKVYLARN SFLSLGAGMG MIMGDGAQPD LRAFGGIVFE PNIGDRDGDG IKDDVDQCPA
EPEDRDSFED EDGCPELDND GDGIPDEDDA CPEQPEDFDG WEDDDGCPDQ NDFDRDGDGI
LDDDDQCPDE PEDKDGFEDE DGCPDPDNDG DGILDVDDLC LNDPEDFDNF EDEDGCPDHD
NDRDRILDED DQCPLEPETY NGNRDDDGCP DSGRVVVTDV SIDILDKVYF EFNSANIKRE
SFPILDAVAA TIMGNPDIRL IEVQGHTDAR GSASYNLRLS DERAKSVRAY LLKKGVEPDR
VDAKGYGETK PIDSSNTEKA HATNRRVEFL IMNRSID