Gene Hoch_5474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5474 
Symbol 
ID8547887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7512820 
End bp7513515 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content68% 
IMG OID646390147 
ProductATP phosphoribosyltransferase 
Protein accessionYP_003269850 
Protein GI262198641 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0040] ATP phosphoribosyltransferase 
TIGRFAM ID[TIGR00070] ATP phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.469215 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.169247 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCGG CCGGCTCGGC AGACGTGGGC GCGCGGCCGC TGGTCGCCGC GCTGCCCAAA 
GGGCGCATCC TCGACGAGAC CGCGGCCGTG TTCGCGCGCG CCGGCTACGA CCTGAGCCCG
GTGTTCGACA GCTCGCGCAA GCTGGTCTAC GAGTGCGGCG ATCTGCGCGT GCTGGTGCTG
CGCTCCTCGG ACGTGCCCGC CTACGTAGCC CACGGCGCCG CCGATTTCGG CGTGGTCGGC
AGCGACGTCC TCGACGAGTA CGGCCACGAC CTCTACGAGC CGCTCGATCT CGGCATCGGC
GCGTGCCGTA TGATCGTGGC CGAACGCGCC GCCCAGCCCG TGGACGCGCG CTCGCAGATC
CACATGTGCA TCGCCACCAA GTACCCGAAG ATCACGCGCC GCTACCTGGA AGCGCGCGGC
CAAACCGCCG AGATCATCAA GCTCTCGGGC GCGATCGAGC TGGCGCCGCT GATGGGCCTG
GCCGACCGAA TCGTCGATAT CACACAGACC GGTGAGACCC TGCGGCAGAA TGGTCTGTCC
ATCGTGGACA CCATCTGCGA AGTCTCCAGC CGCCTGGTGG TCAACCCCGC CTCTCTCAAG
CTGCACAGCG AAAAGATCGC GTCTCTCGTA TCCCGCCTGG AGCAGTCTCT TCACGAGGAT
GCACCTCGCG AGGATGCACC TCGGGGCGAG TGTTGA
 
Protein sequence
MSAAGSADVG ARPLVAALPK GRILDETAAV FARAGYDLSP VFDSSRKLVY ECGDLRVLVL 
RSSDVPAYVA HGAADFGVVG SDVLDEYGHD LYEPLDLGIG ACRMIVAERA AQPVDARSQI
HMCIATKYPK ITRRYLEARG QTAEIIKLSG AIELAPLMGL ADRIVDITQT GETLRQNGLS
IVDTICEVSS RLVVNPASLK LHSEKIASLV SRLEQSLHED APREDAPRGE C