| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5466 |
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| Symbol | |
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| ID | 8547879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 7504039 |
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| End bp | 7505322 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 646390139 |
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| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
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| Protein accession | YP_003269842 |
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| Protein GI | 262198633 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0707326 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAA CCGTCATCCA GGTCGAAAAC CTCTTCAAGA TCTTCGGTGC CAACCCGCAC
CGGGTCTACC CCATGCTCGA GAAGGGCGAC TCGAAAGAGG AGATTCTCGA GAAAACCGGC
TGCGTGGTCG CCATCGACGA CGTGAGCTTC GAGGTCCAGC GGGGCGAATT CTTCGTCATC
ATGGGACTCT CGGGCAGCGG CAAATCGACC ATCATCCGCT GCATCAACCG CCTCATCGAG
CCCACCCGCG GCAAGATTTT GATCGGCGGT CAAGATGTGG TCCAGATGGA CGACAAAGCG
CTCATCGAGA CCCGGCGCAC CAAGATGTCG ATGGTGTTCC AGCACTTCGG CCTGCTGCCG
CACCGCACGG TGCTGGCCAA CGTCGAGTAC GGGCTGGAGA TCTCGGGCAT GGAGGTGGCC
GAGCGCCAGC AGCGCGCGCG CGCGACCATC GCCCAGGTCG GTCTCGAGGG CTACGAGGAC
AGCATGCCCT CGGAGCTGAG CGGCGGTATG CAGCAGCGCG TGGGCCTGGC TCGCGCGCTG
ACCAACGACC CCGACATCCT GCTCATGGAT GAGGCCTTTA GCGCCCTCGA CCCGCTGATC
CGCACGCAGA TGCAGGACGA GCTCATCGAC CTGCAGACGC GCATGCGCAA GACCATCCTG
TTCATCACCC ACGACCTCGA CGAGGCGCTC AAGCTCGGCG ACCGCATCGC CGTGCTCGGC
CCTGGCGGCA AGCTGATGCA GATCGGCACG CCCGAGGACA TCCTCACCGC GCCGGCCAAC
GAGTACGTGC GCACCTTCGT ACAGAACGTC GACCGCACGC GCGCGCTCAC GGCCTCGTCG
ATCATGCACA AGGCGTTGAC CATCGCCGCG CACAAAGACG GCCCTGGCAC CGCCGCGCGC
CGCATGGAGA GCGCCGGCGT GTCCTCGGCC TACGTGCTCG ACAGCGAGCG CCGGCTGCTC
GGCGTGCTCA GCATCGACCG CGCGGTCGAA CTCCAGGCCG GCAAGATCCG CGATGTGAGC
TCGGCGGTCG ACGACGGCGT GTACACCACC ACGCCGCACA CCTCGGTCCG CGAGCTGCTG
GCCACGGCCC TGGTCACCAA GGTGCCCATC GCGGTCCTCG ACGACGATCG ACGTTTGCTC
GGCATCGTCG ATCGCGCCTC GATCCTGGCC GAAATCGCCA GCGAAGACCC CGAGGCCATT
CCCCTGCGGA CGCTGCTCGA CGACGAGTCG TCACCGTCCG CCAAAGACTC CGCCTCCGAC
ATCCCGCAGC GGGCCACGTC CTGA
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| Protein sequence | MSETVIQVEN LFKIFGANPH RVYPMLEKGD SKEEILEKTG CVVAIDDVSF EVQRGEFFVI
MGLSGSGKST IIRCINRLIE PTRGKILIGG QDVVQMDDKA LIETRRTKMS MVFQHFGLLP
HRTVLANVEY GLEISGMEVA ERQQRARATI AQVGLEGYED SMPSELSGGM QQRVGLARAL
TNDPDILLMD EAFSALDPLI RTQMQDELID LQTRMRKTIL FITHDLDEAL KLGDRIAVLG
PGGKLMQIGT PEDILTAPAN EYVRTFVQNV DRTRALTASS IMHKALTIAA HKDGPGTAAR
RMESAGVSSA YVLDSERRLL GVLSIDRAVE LQAGKIRDVS SAVDDGVYTT TPHTSVRELL
ATALVTKVPI AVLDDDRRLL GIVDRASILA EIASEDPEAI PLRTLLDDES SPSAKDSASD
IPQRATS
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