| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5463 |
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| Symbol | |
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| ID | 8547876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 7501044 |
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| End bp | 7502075 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646390136 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_003269839 |
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| Protein GI | 262198630 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.269359 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACG ACTGTCACAG CTCTCGCCCC CCGCACCTGT TCGGACGGGC GTACGCGTTT
GCGCTCGAGC GCGGAGGCCG CCCGCGCGGC GCCCGCGGCC GCCGCGGCGC TGCCATCGCG
GCGGCCGCGA GCGCGACGCT GAGCGCGCGC GCGGCCTGGG CCCAGGACGG CATCGGCGCC
GAGGCCGGCA AGATCCTCGA GTTCGTGCGC CCCTCGGGGC TGCTGCTCGC GCTGGTGGCC
GTGATCGCGG CGACCGTGAC CCTGCGCTTC CTGCACAGCC TCACCGAGCG CCTGGGCGCG
CGCTTCTCGG ACCGCCGCCT GCTGGTGCAG CAGGTGAGCA CCATCCTGCG CTTCGCCGTG
TACCTGGTGA CGATCCTGTT CGTCGCCGGC TCGGCGATCG ATCTCGAACC CGAGGCCGTG
CTCGCGCTCA GCGGCGTCAT CGCGGTCACC GTGGGCTTCG CGCTCAAAGA CCTGGCCTCG
TCGGTGCTCG CCGGCATCAC GATCCTGTTC GACCGTCCCT TCCAGGTCGG CGACCGCGTG
ACTGTGGCCG GACAGTACGG CGAAATCAGC CGCATCGGCC TGCGCTCGGT GCGCCTGGTG
ACCCTCGACG ACTCGCTCGT GACCATCCCC AACAACAAGT TCCTCACCGA GGTCGTGGTC
TCGGGCAACG CCGGCGCCCT CGACATGCAG ATGGTCTTCG ACTTCTACAT CGCCGTGGAT
AGCGACGTCG CCCTGGCCAA GCGCATCGTC TACGAGGCCC TGCGCACCAG CCGCTTCGTG
TACCTCGAAA AACCCGTGGT GGTGCTGGTG CGCGACGTCA TCGAGGCCAA CTACTTCGCC
ACCCGCCTGC GCGCCAAAGC CTACGTGCTC GACGTGCGCT ACGAGCAGCT CTTCATCAGC
GACGTCACCG AGCGCGTCAA GCAAGCGTAT CGCGGCAAGG GCATCCTGCC GCCCACGGTC
ATCGTCGCCC CGAGCGCCCA GCCAGACGCG CAGGCCAACG CGAGCGGCGC GGGCGAGAAC
GCCCCGCGCT GA
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| Protein sequence | MNDDCHSSRP PHLFGRAYAF ALERGGRPRG ARGRRGAAIA AAASATLSAR AAWAQDGIGA
EAGKILEFVR PSGLLLALVA VIAATVTLRF LHSLTERLGA RFSDRRLLVQ QVSTILRFAV
YLVTILFVAG SAIDLEPEAV LALSGVIAVT VGFALKDLAS SVLAGITILF DRPFQVGDRV
TVAGQYGEIS RIGLRSVRLV TLDDSLVTIP NNKFLTEVVV SGNAGALDMQ MVFDFYIAVD
SDVALAKRIV YEALRTSRFV YLEKPVVVLV RDVIEANYFA TRLRAKAYVL DVRYEQLFIS
DVTERVKQAY RGKGILPPTV IVAPSAQPDA QANASGAGEN APR
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