Gene Hoch_5451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5451 
Symbol 
ID8547864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7482968 
End bp7483984 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content67% 
IMG OID646390124 
Productlipase class 2 
Protein accessionYP_003269827 
Protein GI262198618 
COG category[R] General function prediction only 
COG ID[COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.243034 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGAA CCCAGACCTT TGCGATCGCG ACCATTCTGC CCCTGGCTCT CAGCATCACC 
GCCTGCGACA TGAGCGCAGA AGACCTCGAT TCCGAGCTCG TCGGCGAGCA GGACAAGGCG
TCCTCGTGCT CCTCGACCCA GGGGGCCCAG GTCGCCTCGG GTCTCACCAC GCACTTCCGC
CAGTACCTCA ACGCCAACTA CCCCGACATG GACTTCGCCC GCGACGACCT GGCGGGCGGC
AGCTTCGGCG GCTTCATCAG CTCGAGCGAC TGCGCGCGCA AGCAGCCGGT CATCTTTGTG
CACGGCAACA GCGATCGCGC CCTCGGCGGC ACGCTCGGTG GCTGGGAGGA CTCGCTCGAG
TACTTCGAGG GCAAGGGCTA TCGCAGCGCC GAGCTGTTCG CGACCACCTA CGGCACGGGC
AGCGCGTCCG ACTCGGCCTC GTACTACCAC TCGCGCGATA ACCTCACCCA GATCCGCAGC
TTCATCGAGG CCGTGCTCGA CTACACTGGC GCCGACAAGG TCGACGTGAT CTCGCACTCG
ATGGGCGTCA CCATCTCGCG CAAGGCCATC AAGGGCGGCT ACGGCCACGA CCTGCTCGGC
GGCGGCGACT ACAACCTGGG CGCGCCGCTC ACCAGCCGAA TCGACACCTT CGTCGGCATC
GCCGGCGGCA ACCGCGGCCT GGCGACCTGC TACTACACGC CCGGCGTACC CACCTGCGCG
CCGACCAACG GCTTCTACCC CGGCTACGTC TTCGGCTTCA GCGTGGTCGG CGTCTCCGAC
TTCCTCGAGG AGCTGAACTC GTCGTCGCGC TACGAGGGCT CGTTCCGCTA CTCGATCTGG
TCCTCGGTGG ACGAGATCGT CGGCGGCGGC TGCCTGGTCT GGGGCAGCAA CACCTGCCGG
GTTCCCGGAC ACACGGCCGA GAAGAAGTAC TCGAGCTATC CCTACGGCCA CATCGGCGTG
CGCGACCAGA CCCCGGCCGT GCAGTACCAG ATGGTCGCCA ACCACAACGT CCCCTGA
 
Protein sequence
MRRTQTFAIA TILPLALSIT ACDMSAEDLD SELVGEQDKA SSCSSTQGAQ VASGLTTHFR 
QYLNANYPDM DFARDDLAGG SFGGFISSSD CARKQPVIFV HGNSDRALGG TLGGWEDSLE
YFEGKGYRSA ELFATTYGTG SASDSASYYH SRDNLTQIRS FIEAVLDYTG ADKVDVISHS
MGVTISRKAI KGGYGHDLLG GGDYNLGAPL TSRIDTFVGI AGGNRGLATC YYTPGVPTCA
PTNGFYPGYV FGFSVVGVSD FLEELNSSSR YEGSFRYSIW SSVDEIVGGG CLVWGSNTCR
VPGHTAEKKY SSYPYGHIGV RDQTPAVQYQ MVANHNVP