Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_5432 |
Symbol | |
ID | 8547845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 7458376 |
End bp | 7458900 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 646390105 |
Product | HNH endonuclease |
Protein accession | YP_003269808 |
Protein GI | 262198599 |
COG category | [V] Defense mechanisms |
COG ID | [COG1403] Restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0404895 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCACCT TGCTCCTCAA CTCCAGCTAC GAGCCGTTGC GCATCATCTC GTGGCAGCGC GCGGTCACCT TGTTCTATCT CGACAAGGTC GAGGTCGTGC GCAGCTACGA CAAGGTCTTG CGCTCGGCCT CGCGGGTGTT GCCGACGCCG GCCGTGGTGC GATTGTTTCG CTTCGTCCGC CGCCACCAGG TGCGCATCGC GTTCTCGCGC CGCAACGTGT TTTTGCGCGA CGGCTACCGC TGCCAGTACT GCGGCGAGGT GTTGCCCGCG GCCGAGCTGA CCACCGACCA CGTGGTGCCG CGCAGCCGCG GCGGCCCGAC GTCCTGGGAC AACGTGGTCA CCGCCTGCAG CCCCTGCAAT CGCCGCAAGG GCGGACGCTC GCCGGCGCAG GCGCACATGG AGCTGGCCAA GCGACCGCGG CGGCCCGCGC ACCTGCCGGG TCTGGCCGCG CGCATCCGAC GCCACGACGC GCCGCCTTCG TGGCACGACT TCCTGCACAC CAGCAGCACC ATCGAGTCGG CCTGA
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Protein sequence | MRTLLLNSSY EPLRIISWQR AVTLFYLDKV EVVRSYDKVL RSASRVLPTP AVVRLFRFVR RHQVRIAFSR RNVFLRDGYR CQYCGEVLPA AELTTDHVVP RSRGGPTSWD NVVTACSPCN RRKGGRSPAQ AHMELAKRPR RPAHLPGLAA RIRRHDAPPS WHDFLHTSST IESA
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