Gene Hoch_5432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5432 
Symbol 
ID8547845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7458376 
End bp7458900 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content70% 
IMG OID646390105 
ProductHNH endonuclease 
Protein accessionYP_003269808 
Protein GI262198599 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0404895 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACCT TGCTCCTCAA CTCCAGCTAC GAGCCGTTGC GCATCATCTC GTGGCAGCGC 
GCGGTCACCT TGTTCTATCT CGACAAGGTC GAGGTCGTGC GCAGCTACGA CAAGGTCTTG
CGCTCGGCCT CGCGGGTGTT GCCGACGCCG GCCGTGGTGC GATTGTTTCG CTTCGTCCGC
CGCCACCAGG TGCGCATCGC GTTCTCGCGC CGCAACGTGT TTTTGCGCGA CGGCTACCGC
TGCCAGTACT GCGGCGAGGT GTTGCCCGCG GCCGAGCTGA CCACCGACCA CGTGGTGCCG
CGCAGCCGCG GCGGCCCGAC GTCCTGGGAC AACGTGGTCA CCGCCTGCAG CCCCTGCAAT
CGCCGCAAGG GCGGACGCTC GCCGGCGCAG GCGCACATGG AGCTGGCCAA GCGACCGCGG
CGGCCCGCGC ACCTGCCGGG TCTGGCCGCG CGCATCCGAC GCCACGACGC GCCGCCTTCG
TGGCACGACT TCCTGCACAC CAGCAGCACC ATCGAGTCGG CCTGA
 
Protein sequence
MRTLLLNSSY EPLRIISWQR AVTLFYLDKV EVVRSYDKVL RSASRVLPTP AVVRLFRFVR 
RHQVRIAFSR RNVFLRDGYR CQYCGEVLPA AELTTDHVVP RSRGGPTSWD NVVTACSPCN
RRKGGRSPAQ AHMELAKRPR RPAHLPGLAA RIRRHDAPPS WHDFLHTSST IESA