| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5414 |
|---|
| Symbol | |
|---|
| ID | 8547826 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 7438199 |
|---|
| End bp | 7439269 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 646390087 |
|---|
| Product | Glu/Leu/Phe/Val dehydrogenase dimerization region |
|---|
| Protein accession | YP_003269791 |
|---|
| Protein GI | 262198582 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0334] Glutamate dehydrogenase/leucine dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.422648 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.290688 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATCTC CCAACATCTT CTCGCAGCTC CAGGCCCACG ACACCGCGCG CTGCTTTCTG
TTCTCCGACC CCGCCAGCGG CCTGCGCGCG GTCGTGGTCA TCGACGACCT CACTCTGGGT
CCAGCCGCCG GCGGCACGCG CACCCACGCC TATCCCTCGC TCGACCACGC GCTCGCCGAC
GCCGCCGCCC TGGCCCGCGC CATGACCATC AAGTGCGCGC TCGCCGAGAT CCCGGCCGGC
GGCGCCAAGG CCGTGATCAT CGACCATCCC GGGCTGCGCC GGGTGCGCGC CTTCGCGCGC
TTCGGCACCT TCGTCGAGGA GCTCGGCGGC ATCTTCCGCA CCGCCGGCGA CCTCGGCACC
ACGCGCGACG ACCTCGCCAA CATGGCCGAG TACACGCGCT ACGTCACCAT CGACGAGTCC
GGCCTGGCCC AGGCCACCGC GCGCAGCGTG CTGCGCGGCA TCGAGGCCTG CGCCGATGTC
GCCGGCAGAG GCGACGTGAG CGGCCTGCGC GTCGCCGTCC AGGGCTGCGG CATGATCGGC
CGCGCCGTGG CCGAGGCCCT GGCCGCAGCC GGCGCCCGCC TGATGGTCGC CGATCTCGAC
GAAGCCCGCG CCCGCGCCGT GGCCGAGCGC ACGGGCGCCG AGTGGGTCGC CGCCGACGAC
ATCCTGGCCG CCGAGTGCGA CGTGCTCAGC CCGTGCGCGC TCGGCGGCGT GCTCACCGGC
GCGGTCGCCG ACGGCATCCG CGCCTGGGCC GTGTGCGGCG CGGCCAACAA CCAGCTCGGC
GAGCGCGTGG CCGAGCAGCG CCTGCGCGAG CGCCGCATCC TGTTCGTGCC CGACGTCATC
GCCTCGGCCG GCGCCGTGGT CCACGGCATC CTGCGCGAGC ACAGCAGCAC GCGCGACACC
GGCCGGCCCA TCGACCGCCT CGGCGACATC GCCCGCCAGG TGCTGGCGCA GAGCCTCGAG
GACGACGCCT CGCCGACCGA GCTCACCCAC GAGCTGGCGC GCGCGCGGCT GCGCGAGGCC
CGCCGGGTCA ACGACAGCGT GCCCGACCCG CATACCCTGC CGCCGGACTG A
|
|---|
| Protein sequence | MESPNIFSQL QAHDTARCFL FSDPASGLRA VVVIDDLTLG PAAGGTRTHA YPSLDHALAD
AAALARAMTI KCALAEIPAG GAKAVIIDHP GLRRVRAFAR FGTFVEELGG IFRTAGDLGT
TRDDLANMAE YTRYVTIDES GLAQATARSV LRGIEACADV AGRGDVSGLR VAVQGCGMIG
RAVAEALAAA GARLMVADLD EARARAVAER TGAEWVAADD ILAAECDVLS PCALGGVLTG
AVADGIRAWA VCGAANNQLG ERVAEQRLRE RRILFVPDVI ASAGAVVHGI LREHSSTRDT
GRPIDRLGDI ARQVLAQSLE DDASPTELTH ELARARLREA RRVNDSVPDP HTLPPD
|
|---|
| |