| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5411 |
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| Symbol | |
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| ID | 8547823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 7435494 |
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| End bp | 7436318 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646390084 |
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| Product | Haloacid dehalogenase domain protein hydrolase |
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| Protein accession | YP_003269788 |
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| Protein GI | 262198579 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01459] HAD-superfamily class IIA hydrolase, TIGR01459
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.01602 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.187263 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCGC GAATCTCCAT CCCCGAGCTC GTGACTCGGT ACGAAGTGCT CCTGCTCGAC
GCCTACGGCG TGCTCAACGA CGGCCGCGGT CCGCTGGCCT CCGGCCTGGC CCTGGTCCAG
GAGATCGAGC GCCAGGGCAA ACGCCTGTTC GTGGTCACCA ACGACGCCTC GCGGCTGCCG
GCGACCTGCG AGGCGCGCTT TCAGCGCATG GGCTATGCCA TCGCGGCCGA GCAGATCATC
ACCTCGGGCT CGCTGCTCAG CGGCTATTTC GCGACCCACG GGCTGGCCGG CGCGCGCTGC
ATGGTGCTCG GCCCCGAGGA CTCCAAGAGC TACGTGCGCC AGGCCGGCGG CGAGGTCATC
GACGTGAGCG CCGACGGCGA TTGCGACGCC CTGATCATCG GCGACGACGC TGGCTATCCG
TTTCTGCAGT CGGTCGAAGA CGCGCTCGGC ATGCTCTATC GCCACGTCAA CGCCGGCCGC
GAGGTGCACT GCATCCTGCC CAACCCCGAT CTGATCTATC CCAAGACCGA GGGTCAATTC
GGCTACACCA GCGGCGCCGT GGCCGCGCTC ATCGAGCTCG GGCTGCGGCG ACTGTTTCCC
GGACGCGCGC TCGAATTCAC GCCGCTCGGC AAGCCGCACC AGCCCATGTT CGAAGAGGCT
CGCCGGCGCG CGGATACCGA GCGCCTGGTG ATGGTCGGCG ACCAGCTCGA GACCGACATC
ATCGGCGCGC GCGGCGCCGG CATCGACGCC GCCCTGGTGG CCACGGGGGT GAGCGCGTGG
CGCGAGGCCG AGCACACCCT GGCGCCGACC TATCTGCTCG CCTGA
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| Protein sequence | MPARISIPEL VTRYEVLLLD AYGVLNDGRG PLASGLALVQ EIERQGKRLF VVTNDASRLP
ATCEARFQRM GYAIAAEQII TSGSLLSGYF ATHGLAGARC MVLGPEDSKS YVRQAGGEVI
DVSADGDCDA LIIGDDAGYP FLQSVEDALG MLYRHVNAGR EVHCILPNPD LIYPKTEGQF
GYTSGAVAAL IELGLRRLFP GRALEFTPLG KPHQPMFEEA RRRADTERLV MVGDQLETDI
IGARGAGIDA ALVATGVSAW REAEHTLAPT YLLA
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