| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5407 |
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| Symbol | |
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| ID | 8547819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 7428955 |
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| End bp | 7430346 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646390080 |
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| Product | sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_003269784 |
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| Protein GI | 262198575 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.453071 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGAGG ATGACCGCCG TTCTGGGACC TGGGTGACCT ACGCAGCGGG TCGCGCCAAC
TCCCTGCGGG TGCGCCGCTG TCGTATCGAC GCCATCGCCG GTCCGGACAG CGGCGAGTCG
TGTGAACTCG AAGACTCGGT GATTCGCATC GGCGCGCGCC GCAATAACAA TTTGGTCCTG
AGCGACGGGC GGGTGTCCGG CTACCACTGC GAGCTGCGCC TCGACGACCG CGGCTACCGC
CTGGTGGACC TGGGCTCGAC CAATGGCACC TACGTCTCCG GGCTGCGCAT CAACGACGTG
TACATCACGC CCGGGACCGT GATGGAGCTC GGCAACACCC AGCTCCGTTT CGAGCCGCTC
AATGCCTCGG TCGAGGTGCC GCTCTCGGAG CGCGATCGCT TCGGCGAGAT GGTCGGCCAG
AGCGTCAAGA TGCGCGAGCT GTTCGCCCGG CTCGAGCGGC TGGCGCGCAC CGACGCGACC
GTGCTCATCA CCGGCGAGAC CGGCGTGGGC AAGGAGCTGG TGGCGGAGTC GCTGCACGAG
TACTCGGCGC GCGCCGAGGG GCCCTTCGAG GTGCTCGACT GCAGCGCGAT CCCCGAGAAC
CTCATCGAGA GTCAGCTCTT TGGCCACGAG CGCGGCGCCT TCACCGGGGC CACGCAGAGC
TACGAGGGCG TGTTCGAGCG CGCTCACCGC GGCACGGTCT TTCTCGACGA GATCGGCGAG
CTGCCGCTGA GCATGCAGCC CAAGCTGTTG CGCGTGCTCG AGCAGCGCCA GGTGCGGCGC
GTGGGCGGCA CCCGCACCAT CGATGTCGAT ATCCGCGTGG TCGCGGCGAC CAATCGCAAT
CTCGGCGCCG AGGTCAGCAA GGGCAGCTTC CGCGAGGACG TCTACTACCG GCTGGCGGTG
GCGCGCGTGC ACGTGCCGCC GCTGCGCGAG CGGCGCGAGG ACATCCCGCA GTTGGTCGAG
CATCTGCTGA GTCGCACGCC GGGCGGCGAG CGCGCCACGA TCAGCAAGGA CACGCTGGCG
CTGATGGGCA AGCACGACTG GCCGGGCAAC GTGCGCGAGC TGCGCAACGT CATCGAGCGC
GTCGTGTACC TGGCCGAGCC GCCGACCAGC ACGGCCGCCC TGCGCCGTGC GCGGCCGCGG
CGCGAGGGCG AGAGCGGCGC CGAGCCGTCG TCGTCGGATG ACATGTTGGT CATGCCCATC
GACATCGAGA CGCCGTACAA GCTGGCCAAG CAGCGGCTGG TGCACGAGTT CGAGCGCCGC
TACATCACCG AGCTGCTGGC CGCGCACGAC GGCAATATCT CGCAGGCGGC GCGCTCGGCC
GGTATCGACC GCATGTCGGT GCACAAGATC CTCACCCGCC TGGATCTCGA GAATCCGGGC
CGCAGCGGTT AG
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| Protein sequence | MPEDDRRSGT WVTYAAGRAN SLRVRRCRID AIAGPDSGES CELEDSVIRI GARRNNNLVL
SDGRVSGYHC ELRLDDRGYR LVDLGSTNGT YVSGLRINDV YITPGTVMEL GNTQLRFEPL
NASVEVPLSE RDRFGEMVGQ SVKMRELFAR LERLARTDAT VLITGETGVG KELVAESLHE
YSARAEGPFE VLDCSAIPEN LIESQLFGHE RGAFTGATQS YEGVFERAHR GTVFLDEIGE
LPLSMQPKLL RVLEQRQVRR VGGTRTIDVD IRVVAATNRN LGAEVSKGSF REDVYYRLAV
ARVHVPPLRE RREDIPQLVE HLLSRTPGGE RATISKDTLA LMGKHDWPGN VRELRNVIER
VVYLAEPPTS TAALRRARPR REGESGAEPS SSDDMLVMPI DIETPYKLAK QRLVHEFERR
YITELLAAHD GNISQAARSA GIDRMSVHKI LTRLDLENPG RSG
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