Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_5395 |
Symbol | |
ID | 8547807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 7413645 |
End bp | 7415036 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 646390068 |
Product | inner-membrane translocator |
Protein accession | YP_003269772 |
Protein GI | 262198563 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.118271 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTGAAT CCGACGCGCG CGCGCCCGCA GCGGCTGAGC CGCGGCCGCG CCTCGATGTC GCGGCCGCGC TGCGCGAGGC CGGTTTCGCC GCCCTGGTCG GCGCCGCTCT GGGCGTGTCG ATCATCGGCG TGCGCACGGT GACCCAGGGC GGCTCGCTGT CGCTGCAGTA CCGCTGGCCC GAGGCCGCCA TCTTCATCGG CGTGGTGTTC GTCGGCCGCT TCCTGGTGGC CCTGCGCGCG CAGCGCCGGG GCACAGGCGA GAGCCAGTGG CAGCGTCTGC GCAACTACGT GCGAGCGCGC GTAGGCGCCA AATTCGGGGC AGGCGCGAGC GAAGACGCCG GCAAACACAC CGGCAAACTG CCCGTGATCG CCGGCGTGCT CGGGGTCGCG CTGGCCGCCG GGCTGCCGCT GATGCCGTTT GCCGACCGCT ACGTGGTCGA TGTCGCCACG CTGGTGCTCA CGTACATCAT GCTCGGCTGG GGGCTCAACA TCGTCGTCGG TCTGGCCGGG CTGCTCGATC TCGGCTACGT GGCCTTCTAC GCGGTGGGCG CGTATTCGTA CGCGCTGCTG GCGTTTTATT TCGACATGTC GTTCTGGGCC TGTCTGCCGC TGGCGGGCGT GTTCGCGGCC ACCTTTGGCG TGCTGCTCGG CTTCCCCGTG CTGCGCCTGC GCGGCGACTA CCTGGCCATC GTGACCCTGG GCTTCGGCGA GATCATCCGC GTGGTGCTGC TCAACTGGAC CGAGTTCACG CGCGGTCCCG ACGGCATCTC GGGCATCCCG CGGCCGAGCT TTTTCGGACT GCCGTTCTCG CGTCGGGTGC CCGAAGGCGG CGACACCTTC CACACCTTCT TCGGGCTGGA CTATTCGTCC ATGCACCGGA TCGTGTTCCT CTACTACCTG ATCCTGGTGC TGGCGCTGCT GACCAACGCC TTCATCCTGC GGGTGCGCAA GCTGCCGCTG GGGCGCGCCT GGGAGGCGCT GCGCGAGGAC GAGATCGCGT GCCGCTCGCT GGGCATCGAC CCGACCCGCA CCAAGCTCAG CGCGTTCGCG CTCGGCGCCA TGTTCGGCGG CTTCGCGGGC GCGTTCTTCT CGGCGCGGCA GGGCTTCATC AGCCCCGAGA GCTTCACCTT CATCGAATCG GCCGTGATCC TGGCCATCGT GGTCCTCGGC GGCATGGGCA GCCAGCTCGG CGTGGTCATC GCCGCGGTGC TGCTCATCGG CGGCACCGAA TGGTTCCGCG GGCTGGCCGA GTACCGCATG CTCGGTTTCG GCGCCGCCAT GGTGCTGATC ATGGTGTGGC GGCCGCGCGG TCTGCTGGCC CATCGCAAGC CCACGGTCAC CCTGAACACG CCCCGCGACC AGGCGCGCAG CGACATGGAG GTGCCGCCGT GA
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Protein sequence | MSESDARAPA AAEPRPRLDV AAALREAGFA ALVGAALGVS IIGVRTVTQG GSLSLQYRWP EAAIFIGVVF VGRFLVALRA QRRGTGESQW QRLRNYVRAR VGAKFGAGAS EDAGKHTGKL PVIAGVLGVA LAAGLPLMPF ADRYVVDVAT LVLTYIMLGW GLNIVVGLAG LLDLGYVAFY AVGAYSYALL AFYFDMSFWA CLPLAGVFAA TFGVLLGFPV LRLRGDYLAI VTLGFGEIIR VVLLNWTEFT RGPDGISGIP RPSFFGLPFS RRVPEGGDTF HTFFGLDYSS MHRIVFLYYL ILVLALLTNA FILRVRKLPL GRAWEALRED EIACRSLGID PTRTKLSAFA LGAMFGGFAG AFFSARQGFI SPESFTFIES AVILAIVVLG GMGSQLGVVI AAVLLIGGTE WFRGLAEYRM LGFGAAMVLI MVWRPRGLLA HRKPTVTLNT PRDQARSDME VPP
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