Gene Hoch_5386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5386 
Symbol 
ID8547798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7405420 
End bp7406151 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content70% 
IMG OID646390059 
Productoxidoreductase molybdopterin binding protein 
Protein accessionYP_003269763 
Protein GI262198554 
COG category[R] General function prediction only 
COG ID[COG2041] Sulfite oxidase and related enzymes 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.406653 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.237779 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAAA GAGATGAACG CGACCCCGGC CATTCCCCGC TGCGCCCGCG CATGGGACGC 
CGAGATTTCA TTCGCAACGC CGTCGCCGGG ACGGCGATCG TCGCGCTCGG CGGCGGTATC
TACCAGATCG CCGGCGACGA CCTGACCAGC CAGGCGCGGG CCGAGACCCG CAAGGACGGG
CGCCCGCGTC TGCCGCCCGG CCAGCGCGTG ATCCGCGAGC TCAAGCCGAT GGGCGGCCAG
GCCGGTGATC CCAGCGCCAA GAGCTTCCGC CTGCGCGTCC ACGGCCTGGT CGCCAAGCCG
CTGGAGCTGT CCTACGATGA GCTGCTGGCC CTGCCGCAGA CCGAGCAGAG CACGGACGTG
CACTGCGTGA CCGGTTGGTC GGTGCTGGGC GCGAGCTTCC GCGGCGTGCG CGTGGCCGCC
CTGGCCGACA AGGCCAAGGT CAAGAGCAGC GCGCGGCACG TCATCTTCGA GGCCGCGCAC
GGATACACAG CCAACGTACC CCTGGCCGAG GCGACCGCGC CCAACGTGCT GATCACTTAC
CGTATGAACG GCCGGCCCTT TGCCCGCCGC CACGGCGCCC CGGCGCGCGC CCTGGTCCCC
GACCTGTACT TCTGGAAGAG CGCCAAGTGG ATCACGGGCA TTCGCTTCGT GAGCCGCGAT
GAGCCCGGCT ACTGGGAGGT TCGCGGCTAT CACAACCACG CCGATCCGTG GCGCGAGCAG
CGCTATGGGT GA
 
Protein sequence
MPERDERDPG HSPLRPRMGR RDFIRNAVAG TAIVALGGGI YQIAGDDLTS QARAETRKDG 
RPRLPPGQRV IRELKPMGGQ AGDPSAKSFR LRVHGLVAKP LELSYDELLA LPQTEQSTDV
HCVTGWSVLG ASFRGVRVAA LADKAKVKSS ARHVIFEAAH GYTANVPLAE ATAPNVLITY
RMNGRPFARR HGAPARALVP DLYFWKSAKW ITGIRFVSRD EPGYWEVRGY HNHADPWREQ
RYG