Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_5382 |
Symbol | |
ID | 8547794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 7399420 |
End bp | 7399959 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 646390055 |
Product | Peroxiredoxin |
Protein accession | YP_003269759 |
Protein GI | 262198550 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0386] Glutathione peroxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000126467 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.555193 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACAA CTTCAGAATC CGCATCCTCG ATTTCGGCCG AGGCCGCTGC ATCCATCTTC GAAACCCCGG TGAACACGCT CTCCGGTGCG CCTTCCTCGA TCGGCGCGCA TCGCGGCAAG GCCTTGCTGG TCGTCAACGT GGCCTCGCGT TGCGGCCTCA CGCCGCAGTA CGAAGCGCTC GAGAAGCTGC AAAAGGAATA CGGAGAGCGC GGTTTTTCGG TGCTGGGCTT TCCCTGCAAC CAGTTCGGCG GCCAGGAGCC CGGCTCGGCC GAGGAGATTC GCGAGTTCTG CAGCCTCACC TACGGCGTCA CCTTCCCGAT GTTCGAGAAG ATCGAGGTCA ACGGACCCGA GCGCCATCCC ATCTACACCG CGCTCACCGA GGTGCCCGAC CCAGACGGAC ACGTGGGCGA TATCCGCTGG AACTTCGAGA AGTTCGTGAT CTCGGCCGAC GGGCGCACGA TCACGCGCTT CGCGCCCCAG ACCAAGCCGT ATGACGCGGC CGTCATCGCC GCCATCGAGG CCGGTCTACC GGCGCGCTGA
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Protein sequence | MATTSESASS ISAEAAASIF ETPVNTLSGA PSSIGAHRGK ALLVVNVASR CGLTPQYEAL EKLQKEYGER GFSVLGFPCN QFGGQEPGSA EEIREFCSLT YGVTFPMFEK IEVNGPERHP IYTALTEVPD PDGHVGDIRW NFEKFVISAD GRTITRFAPQ TKPYDAAVIA AIEAGLPAR
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