Gene Hoch_5382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5382 
Symbol 
ID8547794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7399420 
End bp7399959 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content64% 
IMG OID646390055 
ProductPeroxiredoxin 
Protein accessionYP_003269759 
Protein GI262198550 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0386] Glutathione peroxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000126467 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.555193 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACAA CTTCAGAATC CGCATCCTCG ATTTCGGCCG AGGCCGCTGC ATCCATCTTC 
GAAACCCCGG TGAACACGCT CTCCGGTGCG CCTTCCTCGA TCGGCGCGCA TCGCGGCAAG
GCCTTGCTGG TCGTCAACGT GGCCTCGCGT TGCGGCCTCA CGCCGCAGTA CGAAGCGCTC
GAGAAGCTGC AAAAGGAATA CGGAGAGCGC GGTTTTTCGG TGCTGGGCTT TCCCTGCAAC
CAGTTCGGCG GCCAGGAGCC CGGCTCGGCC GAGGAGATTC GCGAGTTCTG CAGCCTCACC
TACGGCGTCA CCTTCCCGAT GTTCGAGAAG ATCGAGGTCA ACGGACCCGA GCGCCATCCC
ATCTACACCG CGCTCACCGA GGTGCCCGAC CCAGACGGAC ACGTGGGCGA TATCCGCTGG
AACTTCGAGA AGTTCGTGAT CTCGGCCGAC GGGCGCACGA TCACGCGCTT CGCGCCCCAG
ACCAAGCCGT ATGACGCGGC CGTCATCGCC GCCATCGAGG CCGGTCTACC GGCGCGCTGA
 
Protein sequence
MATTSESASS ISAEAAASIF ETPVNTLSGA PSSIGAHRGK ALLVVNVASR CGLTPQYEAL 
EKLQKEYGER GFSVLGFPCN QFGGQEPGSA EEIREFCSLT YGVTFPMFEK IEVNGPERHP
IYTALTEVPD PDGHVGDIRW NFEKFVISAD GRTITRFAPQ TKPYDAAVIA AIEAGLPAR