Gene Hoch_5377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5377 
Symbol 
ID8547789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7391404 
End bp7393377 
Gene Length1974 bp 
Protein Length657 aa 
Translation table11 
GC content66% 
IMG OID646390050 
ProductHeat shock protein Hsp90-like protein 
Protein accessionYP_003269754 
Protein GI262198545 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0326] Molecular chaperone, HSP90 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCA CAGATGCATC CGCGCCGCAG GAAGGACAGG CGCACTACGA ATTTCGGGCG 
GAGACGCAGC AGCTTCTCAG GCTGATGATT CACTCCTTGT ACTCGAACAA GGAGATCTTC
TTGCGCGAGC TGATCTCGAA CGCGTCTGAC GCGCTCGACA AGCTGCGCTT CGCGGCGCTG
ACCGACCAGT CGCTGGTACC CGAGGAAGAG CTGCACATCC GCATCGAGAT CGACGCTGAG
GCGCGCAGCC TCACCGTGCA CGACAACGGC ATCGGCATGA GCCGCGAGGA CGCGGTGCAG
AACCTGGGCA CCATCGCCAA GTCGGGCACC CAGGAGTTCA TGGCGCTGCT CGAGCAGGCC
AAGGACGCCA AAGAGCGCCC CGACCTCATC GGCCAGTTCG GCGTCGGCTT CTACGCCAGC
TTCCTGGTCG CCGACCGCGT CGTCGTGCTC ACGCGCAAAG CCGGCGAGGT CGAGGCCACG
CGCTGGGAGT CCGACGGCGT CGGCGGCAGC TACACGGTCG AGGCGGCCGA GCGCCCGCAG
GCCGGCACCA GCGTGACCCT GATGCTCAAG CCCGCGGATG ACGAGGACGG CATCCAGGAC
TACACCAAGC CGTGGGTGGT CGAGTCGATC GTGCGCAAGT ACTCCGACTT CGTCTCGTAC
CCGATCAAGA TGAAGCAGGA GGCGCCGCCG CTGGCCAAGC CCGACGAGGA GGCGCCGCCG
GCCGAGCCCG AGGACAAGGT CCTCAACTCG ATGAAGGCGA TCTGGACGCG CTCGCCCTCG
GATGTGCAGG ACGAGGAGTA CAAGGAGTTC TACAAGCACA TCTCGCATGA CTGGAACGAT
CCGCTCACGC ACCTCACGAC CTCGCTCGAG GGCACGCTCG AGGCCAAAGC GCTGCTGTAC
ATCCCGTCGC GCGCGCCCTT CGATCTGTTC CGCGCCGATG CCGAGCGCCG CGGCGTGCAG
CTCTACGTGC GCCGCGTCTT CATCATGGAC GACTGCAAGG AGCTCTTGCC CAACTACCTG
CGCTTCGTCC GCGGCGTGGT CGACTCCGAG GACCTGCCGC TCAACGTCTC GCGCGAGATC
CTGCAGCAGA ACCGGCAGAT CCGGGCCATC CGCAAGCACC TGGTCAAGAA GATCCTCGAC
GCCCTGGCGA ACATGAAGAA GGGCGAGGGC GACGACTACC TCAGCTTCTG GAAGCAGTTC
GGCGCGGTGC TCAAAGAGGG TCTGCTGCTC AGCCAGGAGC GCAACGAGCG CATCTACGAG
CTGCTGCTCG CCGAGTCGTC GAACGGCGAG GCCGGCGCGC TGGTGTCGCT GGGCGAGTAC
AGCGAGCGCA TGAAGGAAGG CCAGGAGGCC ATCTACTACC TCACCGCGCC CTCGGTCGAG
CAGGCGCGCA AGTCGCCGCA CCTCGAGGCC TTCCAGGCCA AGGGCGTGGA GGTGCTGTTT
TTCACCGACG CGGTCGACGA AATCTGGCTG CAGGAGCGCG CCGAGTACGA GGGCAAGAAG
TTCCAGTCGG TGGTCCAGGG CGACATCCAG CTCGGCACCG AGGAGGAGAA GAAGGAGGCC
GAGGAGGAGA AGCAGCGCCA GCAGAACGAG CTCGGCGATC TGCTCCTGGC GGTGCGCGCC
GCGCTGCAGG AAGAGGTCAA GGAGGTGCGG CTGTCGAGCC GCCTCACCTC GTCGCCGGCG
TGTCTGGTCA CCGGCGACGG CGATCTCTCG CCGCAGCTCG AGCGCATCAT GCGCGCGACC
GGCCAGGAGG TGCCCAAGGT CAAGCGGGTG CTCGAGGTCA ATCCCACGCA TCCGGTGGTC
AAGCGCATGC AGGAGATGCA CGAGGCCAGC AAGGCGCATC CGGATCTGCC GAACTTCTCG
CGTCTGCTCT ACGGCCAGGC GATCCTGTCC GAAGGCGGCG AGCTGGAGGA GCCGGCCGAG
TTCGCCAAGC TGATCGCCGA GGTCATGGTC AAGGTCAGCG TCTCGGCCTC CTGA
 
Protein sequence
MATTDASAPQ EGQAHYEFRA ETQQLLRLMI HSLYSNKEIF LRELISNASD ALDKLRFAAL 
TDQSLVPEEE LHIRIEIDAE ARSLTVHDNG IGMSREDAVQ NLGTIAKSGT QEFMALLEQA
KDAKERPDLI GQFGVGFYAS FLVADRVVVL TRKAGEVEAT RWESDGVGGS YTVEAAERPQ
AGTSVTLMLK PADDEDGIQD YTKPWVVESI VRKYSDFVSY PIKMKQEAPP LAKPDEEAPP
AEPEDKVLNS MKAIWTRSPS DVQDEEYKEF YKHISHDWND PLTHLTTSLE GTLEAKALLY
IPSRAPFDLF RADAERRGVQ LYVRRVFIMD DCKELLPNYL RFVRGVVDSE DLPLNVSREI
LQQNRQIRAI RKHLVKKILD ALANMKKGEG DDYLSFWKQF GAVLKEGLLL SQERNERIYE
LLLAESSNGE AGALVSLGEY SERMKEGQEA IYYLTAPSVE QARKSPHLEA FQAKGVEVLF
FTDAVDEIWL QERAEYEGKK FQSVVQGDIQ LGTEEEKKEA EEEKQRQQNE LGDLLLAVRA
ALQEEVKEVR LSSRLTSSPA CLVTGDGDLS PQLERIMRAT GQEVPKVKRV LEVNPTHPVV
KRMQEMHEAS KAHPDLPNFS RLLYGQAILS EGGELEEPAE FAKLIAEVMV KVSVSAS