Gene Hoch_5369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5369 
Symbol 
ID8547781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7383729 
End bp7385027 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content70% 
IMG OID646390042 
Productbeta-lactamase 
Protein accessionYP_003269746 
Protein GI262198537 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.545883 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTTCG CACGTATGGC CCATTACGCA TCGCGTCTTG CGCACGGCGC GTCGCTCGCG 
GGACTGGTCG GCGCAGCGGC GTGCGCGTGG ACGCTGCTGG GGGCCTGCAG CAGCGACGAG
TTCGGCACCC CAGACGATAC GCCGGTAGTC CTCGAGGCCG GCGCGCCCTT CGAGCTTCCC
GCGCGCAGCT ACTGGCCGAG TGAGGCCTGG CGCAGCGCGG GCGAGGACGC GGGACGAGTG
GACGAAGCCG CGCTGGCCAA GCTCGACGCC TACGCCTTTC GGCGCACGGG CGATGAGCAA
GACCGCCGCG GCCAGCGCAC CAACGCGCTG CTCATCGTCA AAGATGGCGT CATCGTCTAC
GAGCGCTACG CGCGCGGCTA CGATCGCGAT TCGCGACTGC TCACCTGGTC GGTGTCCAAG
AGCCTGGCCA ACACGCTCAT CGGCGTGGCC GTGGCCGAGG GCAAGCTCGA TCTCAACGCG
CCGGCGGCCC AGTACTACGA GCCGCTCGCG CGCGACGGCC TGGCCGCGAT TCGCATCACC
GATCTGCTGC GCATGAGCTC GGGCATCGAC TGGCACGAGA GCTACGAGGG CGCGCCCTTT
TTCTCGTCTG TGATCGCCAT GCTCTACGGT CGCGGCCGCC GCGATATGCC CGCGTTCGTC
GCGTCCCACG ACATGGCGCA CGCGCCCGGC AGCCGCTGGC TGTACTCGAG CGGCGACACC
AATCTGCTCA TGGCCGCGCT CAAGAGCACC ATGAGCGAGT CCGAGTACGC GCTGTATCCC
TGGCGCGCGC TGTTCGAGCG CATCGGCATG CGCTCGGTGG TGTGGGAGCG CGACGGCCGC
GGCACCTTCG TCGGCTCGTC GTATCTCTAC GCCACCGCGC GCGACCTGGC GCGCTGGGCG
CTGCTGATGA TGCACGACGG CGTGTGGAAC GGCGAGCGCC TGCTGCCCGA GGGCTGGCTG
CGCTACTCGC TCACGCCGGC GCCCGGGTTC GTGCGCAACG CCCGCGGCGT GTCCGAGAGC
GTGCCCGGCG CGCAGCTCTA CACCAACCGC GCGCTGGGCG AGCGCGAGGT GCCGGCGCCG
TGGCCGAGTC TGCCGGCCGA CGCGTTCGGC GCCTCCGGGC ACTGGGGCAA GCTGGTCACG
GTCGTGCCCT CGCTCGATCT CATCGCCGTA CGCATGGGCG ACGACCGCGA GTACGGCTGC
GCGCCGGTGC TGCGCGAAGA GGGCTGCGTG GACAATCCCG AGGACGCGTT CACGCTGCAT
CACTTTCACG AGCTGCTCAT GGATGTGGTG ACGCCGTGA
 
Protein sequence
MFFARMAHYA SRLAHGASLA GLVGAAACAW TLLGACSSDE FGTPDDTPVV LEAGAPFELP 
ARSYWPSEAW RSAGEDAGRV DEAALAKLDA YAFRRTGDEQ DRRGQRTNAL LIVKDGVIVY
ERYARGYDRD SRLLTWSVSK SLANTLIGVA VAEGKLDLNA PAAQYYEPLA RDGLAAIRIT
DLLRMSSGID WHESYEGAPF FSSVIAMLYG RGRRDMPAFV ASHDMAHAPG SRWLYSSGDT
NLLMAALKST MSESEYALYP WRALFERIGM RSVVWERDGR GTFVGSSYLY ATARDLARWA
LLMMHDGVWN GERLLPEGWL RYSLTPAPGF VRNARGVSES VPGAQLYTNR ALGEREVPAP
WPSLPADAFG ASGHWGKLVT VVPSLDLIAV RMGDDREYGC APVLREEGCV DNPEDAFTLH
HFHELLMDVV TP