Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_5369 |
Symbol | |
ID | 8547781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 7383729 |
End bp | 7385027 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 646390042 |
Product | beta-lactamase |
Protein accession | YP_003269746 |
Protein GI | 262198537 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.545883 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTTTCG CACGTATGGC CCATTACGCA TCGCGTCTTG CGCACGGCGC GTCGCTCGCG GGACTGGTCG GCGCAGCGGC GTGCGCGTGG ACGCTGCTGG GGGCCTGCAG CAGCGACGAG TTCGGCACCC CAGACGATAC GCCGGTAGTC CTCGAGGCCG GCGCGCCCTT CGAGCTTCCC GCGCGCAGCT ACTGGCCGAG TGAGGCCTGG CGCAGCGCGG GCGAGGACGC GGGACGAGTG GACGAAGCCG CGCTGGCCAA GCTCGACGCC TACGCCTTTC GGCGCACGGG CGATGAGCAA GACCGCCGCG GCCAGCGCAC CAACGCGCTG CTCATCGTCA AAGATGGCGT CATCGTCTAC GAGCGCTACG CGCGCGGCTA CGATCGCGAT TCGCGACTGC TCACCTGGTC GGTGTCCAAG AGCCTGGCCA ACACGCTCAT CGGCGTGGCC GTGGCCGAGG GCAAGCTCGA TCTCAACGCG CCGGCGGCCC AGTACTACGA GCCGCTCGCG CGCGACGGCC TGGCCGCGAT TCGCATCACC GATCTGCTGC GCATGAGCTC GGGCATCGAC TGGCACGAGA GCTACGAGGG CGCGCCCTTT TTCTCGTCTG TGATCGCCAT GCTCTACGGT CGCGGCCGCC GCGATATGCC CGCGTTCGTC GCGTCCCACG ACATGGCGCA CGCGCCCGGC AGCCGCTGGC TGTACTCGAG CGGCGACACC AATCTGCTCA TGGCCGCGCT CAAGAGCACC ATGAGCGAGT CCGAGTACGC GCTGTATCCC TGGCGCGCGC TGTTCGAGCG CATCGGCATG CGCTCGGTGG TGTGGGAGCG CGACGGCCGC GGCACCTTCG TCGGCTCGTC GTATCTCTAC GCCACCGCGC GCGACCTGGC GCGCTGGGCG CTGCTGATGA TGCACGACGG CGTGTGGAAC GGCGAGCGCC TGCTGCCCGA GGGCTGGCTG CGCTACTCGC TCACGCCGGC GCCCGGGTTC GTGCGCAACG CCCGCGGCGT GTCCGAGAGC GTGCCCGGCG CGCAGCTCTA CACCAACCGC GCGCTGGGCG AGCGCGAGGT GCCGGCGCCG TGGCCGAGTC TGCCGGCCGA CGCGTTCGGC GCCTCCGGGC ACTGGGGCAA GCTGGTCACG GTCGTGCCCT CGCTCGATCT CATCGCCGTA CGCATGGGCG ACGACCGCGA GTACGGCTGC GCGCCGGTGC TGCGCGAAGA GGGCTGCGTG GACAATCCCG AGGACGCGTT CACGCTGCAT CACTTTCACG AGCTGCTCAT GGATGTGGTG ACGCCGTGA
|
Protein sequence | MFFARMAHYA SRLAHGASLA GLVGAAACAW TLLGACSSDE FGTPDDTPVV LEAGAPFELP ARSYWPSEAW RSAGEDAGRV DEAALAKLDA YAFRRTGDEQ DRRGQRTNAL LIVKDGVIVY ERYARGYDRD SRLLTWSVSK SLANTLIGVA VAEGKLDLNA PAAQYYEPLA RDGLAAIRIT DLLRMSSGID WHESYEGAPF FSSVIAMLYG RGRRDMPAFV ASHDMAHAPG SRWLYSSGDT NLLMAALKST MSESEYALYP WRALFERIGM RSVVWERDGR GTFVGSSYLY ATARDLARWA LLMMHDGVWN GERLLPEGWL RYSLTPAPGF VRNARGVSES VPGAQLYTNR ALGEREVPAP WPSLPADAFG ASGHWGKLVT VVPSLDLIAV RMGDDREYGC APVLREEGCV DNPEDAFTLH HFHELLMDVV TP
|
| |