Gene Hoch_5360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5360 
Symbol 
ID8547772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7374451 
End bp7375242 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content68% 
IMG OID646390033 
Producthydroxyacylglutathione hydrolase 
Protein accessionYP_003269737 
Protein GI262198528 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID[TIGR03413] hydroxyacylglutathione hydrolase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG TTCCCGTACC GTGTCTCAAA GACAACTACG CCTATCTTGT GATCTGCGAA 
GCGACGAACG CGGCCACCGT GGTCGACCCC TCGGAGGCGG CTCCGGTGCT CGCCGCACTC
GAGCGTGAGG GCGTGGCGCT ACAGGCGATC TGGAATACCC ATCATCACTG GGACCACGTC
GGCGGCAACA AGGAGCTGCT GCAGCGCTTT CAGGAGATCG ACGTGGTCGG GCACGCCTCG
GACAAGGACC GCATCCCGGG CCAGAACCGC TTTGTCGAGG ACGGTGAGGA GGTTAGCCTG
GGCGAGGAGC TGCGCGCGCA GATCCTCTTC AATCCCGGCC ACACGCGCGG CGCCATCAGC
TATCAGCTCG CGGCCCACGA CGCCGTGTTC ACCGGCGATA CGCTGTTTCT CGCCGGTTGC
GGCCGGCTGT TCGAGGGGAC GGCCGAGCAG ATGCACAGCT CGCTGTCGCG CCTGGCCGCG
CTGCCGCCGA CGACGCGCGT GTTCTGCGGG CACGAGTACA CGGTCGCGAA TCTGCGCTTT
GCCGCCGCGG TCGAGCCTGA TAATCAGGCC GTGAGCGAGC GCGCGGCCGA GGTGGCCAAG
CTGCGCGAGG CCGGGCAGCC GAGCGTGCCC GCGAGCATCG CGCTCGAGCG CGTGACCAAC
CCCTTTTTGC GCACCGATGT CGCCGAGGTC ATTGAATCCG TCCGCGCGTC CGAGGCTGCC
GCTCAGGGCG AGGAAGACAG CTCGGGAGCC GCGATCTTCG CCGCGCTGCG CCGCTGGAAA
GACAGCTTCT GA
 
Protein sequence
MRIVPVPCLK DNYAYLVICE ATNAATVVDP SEAAPVLAAL EREGVALQAI WNTHHHWDHV 
GGNKELLQRF QEIDVVGHAS DKDRIPGQNR FVEDGEEVSL GEELRAQILF NPGHTRGAIS
YQLAAHDAVF TGDTLFLAGC GRLFEGTAEQ MHSSLSRLAA LPPTTRVFCG HEYTVANLRF
AAAVEPDNQA VSERAAEVAK LREAGQPSVP ASIALERVTN PFLRTDVAEV IESVRASEAA
AQGEEDSSGA AIFAALRRWK DSF