| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5347 |
|---|
| Symbol | |
|---|
| ID | 8547759 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 7357518 |
|---|
| End bp | 7358198 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 646390020 |
|---|
| Product | protein-L-isoaspartate O-methyltransferase |
|---|
| Protein accession | YP_003269724 |
|---|
| Protein GI | 262198515 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
|---|
| TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAGCGC GTCCTCCCGA CACAACGCCC ATCGACGCCC AGCGCTGGCG CATGGTCGAG
GAACAGCTCA TCGCCCGCGG TATCGCCGAC CAGCGCGTGC TCCGCGCCAT GGTCGCGGTG
CCGCGCGAGC GCTTCGTCCC CGCCGCCTTG CGCGCCCAGG CTCACAACGA CTCACCGCTG
CCCATCGGGC ACGCGCAGAC CATCAGCCAG CCGTACATCG TCGCCGCCAT GAGCGAGCGC
CTCGGCGTCG CTCCGGGCGC GCGCGTACTC GAAATCGGCA CCGGGTCTGG CTATCAGACC
GCGGTGCTGG CCGAGCTCGG CGCCGAGGTG TTCAGCATCG AACTCGTGCC CGAGCTGTCC
GCGGGCGCGG CCGCGGTGCT GGCCGCGCTC GGCTACCAGC GCGTGCATCT GCGGGTCGGC
GATGGCTACC GGGGTTGGCC CGAGGCCGCC CCCTTCGACG CGATCCTGCT GGCCGCGGCG
CCGCCCGCGC TGCCCGCTCC GCTGATCGAC CAGCTCGCCA CCGGCGGCCG CCTGATCGCG
CCTGTGGGTC GCGAGCGGCA AGAGCTGCGC ATGCTCGAAC GCACGGCCGC AGGCGTGACC
AGCCAGGTGC TGTTTCCGGT GCTGTTCGTG CCGATGCTCG GGCGCGCCCA ACAGCCGGAG
GACGCTCAGA CGCCGGACTG A
|
|---|
| Protein sequence | MVARPPDTTP IDAQRWRMVE EQLIARGIAD QRVLRAMVAV PRERFVPAAL RAQAHNDSPL
PIGHAQTISQ PYIVAAMSER LGVAPGARVL EIGTGSGYQT AVLAELGAEV FSIELVPELS
AGAAAVLAAL GYQRVHLRVG DGYRGWPEAA PFDAILLAAA PPALPAPLID QLATGGRLIA
PVGRERQELR MLERTAAGVT SQVLFPVLFV PMLGRAQQPE DAQTPD
|
|---|
| |