| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5329 |
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| Symbol | |
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| ID | 8547741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 7325056 |
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| End bp | 7326789 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 646390003 |
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| Product | histone deacetylase superfamily |
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| Protein accession | YP_003269707 |
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| Protein GI | 262198498 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGTCT GGTACTGCGC GGCGTATCGC TTGCCGATCG CGTCGGTCGG CGCCGAGCGT
CGCCTCGATC CGCGCCGGGC CGACTTCGTC GCCTGGTATC TGCTGGAGCG CGCCGGGGTG
TCGCCGAGCT GGTTTCGCGA GCCCGTGCAG GTGAGCTACG CGGCGCTGGC GCGGGTGCAC
GACAGCGCGC TGCTCGAGTC GCTGACCACC TCGGCGGGGT TGGCGCGCGT GTTCGCGGTG
TCGCCGGCCG AGGTGCCGGT GAGCGAGACC CTGCGCAGCG TGCGTCTGGC CTGCGGCGCG
ACCGTGGAGG CCGCGCGCGA GGCGCTCAGC ACGGGGCTGC CGACCTGCAA TCTGCTGGGC
GGCTTTCACC ACGCCACGCC GGACCGGGCG GCCGCCTTCT GCCCGGTCAA CGACATCGCC
GTGGCGGTGG CCGAGCTGCG CGCGCAGGGC GTTACCGGAC AGGTGGTCGT GATCGATCTC
GACGCCCATC CACCCGATGG CACGGCAGCG TGTCTGGCCG ACGACGAGGC GGCCTGGATC
GGCTCGCTCT CGGGCGTGTG CTGGCAGACG CTGCCCGGCG TCGACGAGAC CGTGCTGCCG
CGCGGCTGCG GCGACGCCGC GTATCTGGCC GCGCTCGGCG CGCTGCTCGA GCGCATGCCG
AGGCCGGAGC TGGCCTTTGT CATCGCCGGC GGCGACGTGT TGCGCGGCGA TTGCCTGGGC
ATGCTGGGCA TGTCGCTGGC CGGCGCGCGC GAGCGCGACC TGCGCGTGGC CGAAGCGCTC
GAGGGCGTGC CCAGCGTGTG GCTGCCCGGC GGCGGCTACC ACAGCGACGC CTGGCGGGTG
TGCGCCGGCA CCGCGCTGGC GGTCGGGCAG GGCACGCGGC GCGCCATCCC GCTCGACTAC
GATCCACTCG ACGCCCACTT CAGCGCCATC GCCGAGCGCC TGGGCGGCGA GAGCCGCGGG
GGGGGCGACG AGTTCGAGCT AGCCGAGATC GAGGCCGAGC TGTTCGGCCG CGGTCTGCCG
GCGCAGCGCA TGCGTCTGTT CGACACCTGG AATCCGGCCG GCATCGAGTA TGCGCTGTAT
CGCTTCGGCA TCCTGCCGCA CCTGCGCCGG CTGGGCTACG GCGACTTCCG GGTGACGCTG
TCGCAGGCCT CGGCCGGGCA GTGCGTGCGC CTCCACGCCG CGATCACCAC GCCCGCGCTG
GGCAGCCGCG GTCCCCGCCT GCGCAGCGAG CACGTGCTCG CCGAGTGCGT GCTCGCACGG
CAGCGCGTGG ACGGCCACGA GCTCTTGTTC ATCAACTGGC TCACGCTGCG CAATCCGCGC
GCGGCAGCGG CGCCAGAGGG CGACCTGCTG CCCGGTCAGG AGGCGCCCGG GCTGGGCCTG
ATGCGCGAGA CCGAGGAGAT CTTCGAGATG ATGGCCGAGC GCCTCGAGCT CGCCGGCACG
GCGCTGTGTC CGGCCCACTA TCACCTGGCC GTGAGCGCGT CGCGGCGCGG CTATCGCTTC
GCCGATGGCG CGCGTCATGG CCGCTTCGAG GCGCTGATGC GCGACCTCGA GCCCCTGGGC
GTGCGCGCGG CGTCGATCGC GGTCTACGAG GGCCGCGTGC GCCTCGAGGG CGCTCCGTAC
ACCTGGGAGC CGAGCGTCAT GGTGGCCGGC ATCCCGGCTC CGCCGGACCA GCAGCAAGAC
GCGGTCGCGG AGCGCGAGCG GGTGTCGTTT TCGTGCGCGC CGGCAGCCGG TTGA
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| Protein sequence | MAVWYCAAYR LPIASVGAER RLDPRRADFV AWYLLERAGV SPSWFREPVQ VSYAALARVH
DSALLESLTT SAGLARVFAV SPAEVPVSET LRSVRLACGA TVEAAREALS TGLPTCNLLG
GFHHATPDRA AAFCPVNDIA VAVAELRAQG VTGQVVVIDL DAHPPDGTAA CLADDEAAWI
GSLSGVCWQT LPGVDETVLP RGCGDAAYLA ALGALLERMP RPELAFVIAG GDVLRGDCLG
MLGMSLAGAR ERDLRVAEAL EGVPSVWLPG GGYHSDAWRV CAGTALAVGQ GTRRAIPLDY
DPLDAHFSAI AERLGGESRG GGDEFELAEI EAELFGRGLP AQRMRLFDTW NPAGIEYALY
RFGILPHLRR LGYGDFRVTL SQASAGQCVR LHAAITTPAL GSRGPRLRSE HVLAECVLAR
QRVDGHELLF INWLTLRNPR AAAAPEGDLL PGQEAPGLGL MRETEEIFEM MAERLELAGT
ALCPAHYHLA VSASRRGYRF ADGARHGRFE ALMRDLEPLG VRAASIAVYE GRVRLEGAPY
TWEPSVMVAG IPAPPDQQQD AVAERERVSF SCAPAAG
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