Gene Hoch_5327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5327 
Symbol 
ID8547739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7323313 
End bp7324389 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content70% 
IMG OID646390001 
Producthypothetical protein 
Protein accessionYP_003269705 
Protein GI262198496 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4775] Outer membrane protein/protective antigen OMA87 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATTG CGCTGCTGGT GGCGCTGCTC TGCGCGAGCG CGTCGGCCAC AGCCGACGAC 
ACCGTGCACG ACACCGTCGG CAGCGGCTGG GTGGCGCTCC CGGGCCTGTG GTTCAACTCC
GAGCAGGGCG TCGGCGTGAG CGCGCTGGCG CTGCACTACT TCCCGCTCGA GGCCGAAGCC
GAGCGCCCCT CCGAGGTCTC GCTGGTCGGC CTGGCCACCA CCGAAGGCGA CGCCGCCGTG
CGCGTCGAGC CCTCGCTACA CCTCGGCCAC GGCCTCTACC GCATAGACAC CCGCGTCGAG
CTGGCGCGGC GCGTGAGCTC GTTCTACGGC ATCGGCAACG ACAGCGAGCT CGCCGCCCAG
GAACGCTACC GGCGCACCCG CTTCTCGGGT CGCGCCGAGC TCACCCGCCG CCTGCGCCCC
GACCTGTATC TCGGCCCCGC GCTCGAGGGC TTCTGGAATT CCGATGTCGC CAGCGACACC
GAGATGCTCC CGGCGCTGAT GAGCGGCGAC ATCCTCGGCG CCGACAGCGG CAGCGTGATC
GGCGCCGGCA TGATCGCGCG CTACGACACC CGCAACCGCA GCTACGCGCC CTCGCTGGGC
GCGCTGCTCG AGGGCTCGCT CTTCGTCTAC GACCGCGCCC TGGGCAGCGA CTACGGCTTC
GCCGCCACCA CCGCCAACGC CCGGGTCTAC TTCGAACCCC ACAGCGGTCA CGTCGTCGCC
CTGCAGGCGC GCGGCGACTT CCGCGCCGGC GAGGTTCCCT TCGAAAATCT CGCCAAGGCC
GGTGACGGCA ATTTGTTACG TGGACTACGA AGTGGCCGAT TTCGCGATAC CCATTTTGTC
GGTTCGCAAA TCGAATATCG CTCGCCCATG GTGTGGCGCG TCGGCGCCGC CCTGTTCGCG
GCCACCGGAC GCGTCGGCGC CGACCTCGGC GAGCTCTTCG ACGCCGGCTG GAAAGTCGCC
GGCGGCGGCG GTCTGCGCTT CGCCGTCAAG CGCGCCGACC GCCTCCACCT GCGCGTCGAC
GTAGGCGTGG CCGAAGACGG CTATCAGCTC TACATCGACG TCCGCGAGGC GTTCTGA
 
Protein sequence
MNIALLVALL CASASATADD TVHDTVGSGW VALPGLWFNS EQGVGVSALA LHYFPLEAEA 
ERPSEVSLVG LATTEGDAAV RVEPSLHLGH GLYRIDTRVE LARRVSSFYG IGNDSELAAQ
ERYRRTRFSG RAELTRRLRP DLYLGPALEG FWNSDVASDT EMLPALMSGD ILGADSGSVI
GAGMIARYDT RNRSYAPSLG ALLEGSLFVY DRALGSDYGF AATTANARVY FEPHSGHVVA
LQARGDFRAG EVPFENLAKA GDGNLLRGLR SGRFRDTHFV GSQIEYRSPM VWRVGAALFA
ATGRVGADLG ELFDAGWKVA GGGGLRFAVK RADRLHLRVD VGVAEDGYQL YIDVREAF