Gene Hoch_5325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5325 
Symbol 
ID8547737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7321728 
End bp7322372 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content73% 
IMG OID646389999 
ProductUracil phosphoribosyltransferase 
Protein accessionYP_003269703 
Protein GI262198494 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2065] Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCCCG AGCAGACCAG CGGCCCCGGA GGACGAGCGC GCGGTCTCGA TCCCCGCCTC 
GAAGAAGTGC GCACCATCGC CGACGCCGAG AGCAGCATGC GCATGCTGCG GCGCATGGCT
CACGAGATCG TCGAGCGCAA CCGCGGCGTC CGCGATCTCG CGCTGGTGGG CATCCGCACC
GGCGGTTTGT ACCTGGCCGA GCGGCTGCAG CAGCTCATCC TCGAGTTCGA GGACGCGGCG
CCGCCGCTCG GCGCCGTGGA CATCAGCCTG TATCGCGACG ATGTCGGCAG CGGCCTGCCG
CGACCGGTCA TCGGCCCCAC CGAGTTGCCC TTCGAGCTGT CGGGGACCAC GTTGGTGCTG
GTCGACGACG TGCTGTACAC CGGGCGCACG GTGCGGGCCG CGCTCGACGC GCTCATGGAC
TACGGGCGGC CCCGGGCGGT GCGGCTCGCG GCCCTGATCG ACCGCGGTCT GCGCGAGCTG
CCCATCGGCG CCGACCACGT CGGCCTGCAA GTCGAGACCG CGCCGGCGGA GACCGTCAAG
GTGCTGTTCG ACGACGCCGG CAAGGTCGAG CGTGTGGTGC TCGCGCGGCC GGTCTCCGAG
CAGGCGGGCG GGGCGACGCC GGGCGGGGAG GCGACGACGC GATGA
 
Protein sequence
MKPEQTSGPG GRARGLDPRL EEVRTIADAE SSMRMLRRMA HEIVERNRGV RDLALVGIRT 
GGLYLAERLQ QLILEFEDAA PPLGAVDISL YRDDVGSGLP RPVIGPTELP FELSGTTLVL
VDDVLYTGRT VRAALDALMD YGRPRAVRLA ALIDRGLREL PIGADHVGLQ VETAPAETVK
VLFDDAGKVE RVVLARPVSE QAGGATPGGE ATTR