Gene Hoch_5321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5321 
Symbol 
ID8547733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7316097 
End bp7317887 
Gene Length1791 bp 
Protein Length596 aa 
Translation table11 
GC content73% 
IMG OID646389995 
Productanion transporter 
Protein accessionYP_003269699 
Protein GI262198490 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0471] Di- and tricarboxylate transporters 
TIGRFAM ID[TIGR00785] anion transporter 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTTTTA AACTAGGCGC GGTGGACGAG ATTCAGCAGA GCGCGTCGGA GGGGGCCGGG 
CGGCGCCTCG TCGGTCCCGG CTACATCATC GGCGTGTGCG GCTTCGCCGG TGTGCTGGCG
GCGCCCTGGT GGGTCGCGGT GGCGGCGCTA TCATGGCTGG GCGCGGGCGC GGGCGCGGGC
GCGCTGCTGC TCGCGCTTCT GCTGGCGGGG CGCAAGCGGC TGGGCGAGCG CGCGCGCAAC
GCGCTGGTGG CCGCGCTGGT GCTGGCCATC ACGGCCGCGC TGGCGCCCGC CCTGACGGCC
ATGCCGGGCG AGGCGCGGCG CACCTTGGCG GTGGCCGTGC TCATGGCCGC GTGGTGGGTG
TCGTCGGCGA TCCCGATCCC GGCGACCTCG CTGCTGCCGC TGCTGCTGCT GCCGGCGCTG
GGCGTGATGA GCGCGGGCAA GACCGCGGCC AATTACGCCA ACAACGTCGT GTTCCTGTTC
ATGGGCGGTT TCGTGCTGGC GCTGGCCATC CAGCGCTGGG GCCTGCATCG GCGCATCGCG
CTGCACATCG TGCTGCGCGT GGGCACCAAC CCGCGGCGCA TGGTGTTCGG GTTCATGCTG
GCGACCGCGG CGCTGTCGAT GTGGATTTCG AACACAGCGA CCGCGCTCAT GATGTTGCCC
ATCGCCCTGG CCGTCGCCGG CTCGCTGCGC GATGTCGCAG GCGCGCGCGG GTCGGGGCGG
CCGGGTCAGG AGAACGTCCA GATGTCCGAT TTCACCACGG CCCTGCTCTT GGCCGTGGCC
TACGGCGCGT CGATCGGCGG TCTGGGCACG CCCATCGGCA CGCCGCCGAA TCTGTCGTTC
TTGCGCATCT TTCAGATTCT CTACCCCGAC GCGCCCGGGC TCAGCTTCGG CCAGTGGCTG
CTGGCGATGG GGCCGCTGGT GCTGGTGTTG CTGCCGCTGG CGTGGTGGGT GCTGGTCGGG
CTGGCGTTTC GCCTGCCGCG GGCGCGGGTC GCGGCCGGGG GCGACATCAT CGCCGGCGAG
CTGCGCGCGC TGGGGCCGAT GGGCGCGGCC GAGCGCCGGA CCGCGATGCT GTTCGCGGCG
GCCGCGGTGC TGTGGGTGAC GCGCGGCGAT CTCGACTTCG GCGCGCTGCG CATCCCCGGC
TGGGCGGGCT TGCTCGAGGA CTGGCTCGCG GGGCCGTTCT CCGCGGCCTA TCTGCACGAC
GCCACCGTGG CCATCGGCGT GGCCGTGGCC AGCTTTCTGA TCCCGGGCGA GCCCGACGAG
CACGGGCGGG CGCGCGCGCT CATGGACTGG GATACGGCCA AGGGGCTGCC CTGGGGCATC
CTGCTGCTCT TCGGTGGCGG TTTCGCGCTG GCCGCGGCCT TTCACGAGGC CGGCTTATCG
CGCTACCTGG GCGAGAGCTT CGCCGCCGTG GTCGGCGGTG TACCGCCGCT GCTGTTGGTG
CTGGCCACCG TGGTGCTGCT CACGCTGCTC ACCGAGCTGA CCTCGAACAC GGCGACCACC
GAGGTGATGC TGCCGGTGCT CGCGGGCGGC GCCAGCGCGC TGGGGGCGCA TCCCTTCCTG
CTGATGTTGC CGGCGACCTT GGCGGCCTCG TGCGCGTTCA TGCTGCCCAT CGCCACGCCG
CCCAACGCCA TCGTCTTCGG CAGCGGCGCC ATCGCCATGC GCGACATGGT GCGCGCCGGG
CTGTGGCTCA ATCTGCTCAG CGCCGTGGTC ATCGCGCTGG GCGTGTATTT CGTGTCGGCC
GCGGTGCTCG GCGTCGATCT CGCGCAGGTC CCCGCCTGGG CGGCGCCGTG A
 
Protein sequence
MLFKLGAVDE IQQSASEGAG RRLVGPGYII GVCGFAGVLA APWWVAVAAL SWLGAGAGAG 
ALLLALLLAG RKRLGERARN ALVAALVLAI TAALAPALTA MPGEARRTLA VAVLMAAWWV
SSAIPIPATS LLPLLLLPAL GVMSAGKTAA NYANNVVFLF MGGFVLALAI QRWGLHRRIA
LHIVLRVGTN PRRMVFGFML ATAALSMWIS NTATALMMLP IALAVAGSLR DVAGARGSGR
PGQENVQMSD FTTALLLAVA YGASIGGLGT PIGTPPNLSF LRIFQILYPD APGLSFGQWL
LAMGPLVLVL LPLAWWVLVG LAFRLPRARV AAGGDIIAGE LRALGPMGAA ERRTAMLFAA
AAVLWVTRGD LDFGALRIPG WAGLLEDWLA GPFSAAYLHD ATVAIGVAVA SFLIPGEPDE
HGRARALMDW DTAKGLPWGI LLLFGGGFAL AAAFHEAGLS RYLGESFAAV VGGVPPLLLV
LATVVLLTLL TELTSNTATT EVMLPVLAGG ASALGAHPFL LMLPATLAAS CAFMLPIATP
PNAIVFGSGA IAMRDMVRAG LWLNLLSAVV IALGVYFVSA AVLGVDLAQV PAWAAP