Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_5321 |
Symbol | |
ID | 8547733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 7316097 |
End bp | 7317887 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 646389995 |
Product | anion transporter |
Protein accession | YP_003269699 |
Protein GI | 262198490 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0471] Di- and tricarboxylate transporters |
TIGRFAM ID | [TIGR00785] anion transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTTTTTA AACTAGGCGC GGTGGACGAG ATTCAGCAGA GCGCGTCGGA GGGGGCCGGG CGGCGCCTCG TCGGTCCCGG CTACATCATC GGCGTGTGCG GCTTCGCCGG TGTGCTGGCG GCGCCCTGGT GGGTCGCGGT GGCGGCGCTA TCATGGCTGG GCGCGGGCGC GGGCGCGGGC GCGCTGCTGC TCGCGCTTCT GCTGGCGGGG CGCAAGCGGC TGGGCGAGCG CGCGCGCAAC GCGCTGGTGG CCGCGCTGGT GCTGGCCATC ACGGCCGCGC TGGCGCCCGC CCTGACGGCC ATGCCGGGCG AGGCGCGGCG CACCTTGGCG GTGGCCGTGC TCATGGCCGC GTGGTGGGTG TCGTCGGCGA TCCCGATCCC GGCGACCTCG CTGCTGCCGC TGCTGCTGCT GCCGGCGCTG GGCGTGATGA GCGCGGGCAA GACCGCGGCC AATTACGCCA ACAACGTCGT GTTCCTGTTC ATGGGCGGTT TCGTGCTGGC GCTGGCCATC CAGCGCTGGG GCCTGCATCG GCGCATCGCG CTGCACATCG TGCTGCGCGT GGGCACCAAC CCGCGGCGCA TGGTGTTCGG GTTCATGCTG GCGACCGCGG CGCTGTCGAT GTGGATTTCG AACACAGCGA CCGCGCTCAT GATGTTGCCC ATCGCCCTGG CCGTCGCCGG CTCGCTGCGC GATGTCGCAG GCGCGCGCGG GTCGGGGCGG CCGGGTCAGG AGAACGTCCA GATGTCCGAT TTCACCACGG CCCTGCTCTT GGCCGTGGCC TACGGCGCGT CGATCGGCGG TCTGGGCACG CCCATCGGCA CGCCGCCGAA TCTGTCGTTC TTGCGCATCT TTCAGATTCT CTACCCCGAC GCGCCCGGGC TCAGCTTCGG CCAGTGGCTG CTGGCGATGG GGCCGCTGGT GCTGGTGTTG CTGCCGCTGG CGTGGTGGGT GCTGGTCGGG CTGGCGTTTC GCCTGCCGCG GGCGCGGGTC GCGGCCGGGG GCGACATCAT CGCCGGCGAG CTGCGCGCGC TGGGGCCGAT GGGCGCGGCC GAGCGCCGGA CCGCGATGCT GTTCGCGGCG GCCGCGGTGC TGTGGGTGAC GCGCGGCGAT CTCGACTTCG GCGCGCTGCG CATCCCCGGC TGGGCGGGCT TGCTCGAGGA CTGGCTCGCG GGGCCGTTCT CCGCGGCCTA TCTGCACGAC GCCACCGTGG CCATCGGCGT GGCCGTGGCC AGCTTTCTGA TCCCGGGCGA GCCCGACGAG CACGGGCGGG CGCGCGCGCT CATGGACTGG GATACGGCCA AGGGGCTGCC CTGGGGCATC CTGCTGCTCT TCGGTGGCGG TTTCGCGCTG GCCGCGGCCT TTCACGAGGC CGGCTTATCG CGCTACCTGG GCGAGAGCTT CGCCGCCGTG GTCGGCGGTG TACCGCCGCT GCTGTTGGTG CTGGCCACCG TGGTGCTGCT CACGCTGCTC ACCGAGCTGA CCTCGAACAC GGCGACCACC GAGGTGATGC TGCCGGTGCT CGCGGGCGGC GCCAGCGCGC TGGGGGCGCA TCCCTTCCTG CTGATGTTGC CGGCGACCTT GGCGGCCTCG TGCGCGTTCA TGCTGCCCAT CGCCACGCCG CCCAACGCCA TCGTCTTCGG CAGCGGCGCC ATCGCCATGC GCGACATGGT GCGCGCCGGG CTGTGGCTCA ATCTGCTCAG CGCCGTGGTC ATCGCGCTGG GCGTGTATTT CGTGTCGGCC GCGGTGCTCG GCGTCGATCT CGCGCAGGTC CCCGCCTGGG CGGCGCCGTG A
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Protein sequence | MLFKLGAVDE IQQSASEGAG RRLVGPGYII GVCGFAGVLA APWWVAVAAL SWLGAGAGAG ALLLALLLAG RKRLGERARN ALVAALVLAI TAALAPALTA MPGEARRTLA VAVLMAAWWV SSAIPIPATS LLPLLLLPAL GVMSAGKTAA NYANNVVFLF MGGFVLALAI QRWGLHRRIA LHIVLRVGTN PRRMVFGFML ATAALSMWIS NTATALMMLP IALAVAGSLR DVAGARGSGR PGQENVQMSD FTTALLLAVA YGASIGGLGT PIGTPPNLSF LRIFQILYPD APGLSFGQWL LAMGPLVLVL LPLAWWVLVG LAFRLPRARV AAGGDIIAGE LRALGPMGAA ERRTAMLFAA AAVLWVTRGD LDFGALRIPG WAGLLEDWLA GPFSAAYLHD ATVAIGVAVA SFLIPGEPDE HGRARALMDW DTAKGLPWGI LLLFGGGFAL AAAFHEAGLS RYLGESFAAV VGGVPPLLLV LATVVLLTLL TELTSNTATT EVMLPVLAGG ASALGAHPFL LMLPATLAAS CAFMLPIATP PNAIVFGSGA IAMRDMVRAG LWLNLLSAVV IALGVYFVSA AVLGVDLAQV PAWAAP
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