Gene Hoch_5312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5312 
Symbol 
ID8547724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7306845 
End bp7308068 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content71% 
IMG OID646389986 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_003269690 
Protein GI262198481 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1404] Subtilisin-like serine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.368207 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAAAC TCTTCTCGTT CGCCGTACTT CCGGCTGCTG GTGCAGCCGC CCTGCTTCTC 
GCCTCCGGCT GCCAGACCGA TACCTCTGCC TGGGAGACGG AGCAGGCCGA AGAGGCCCTC
GTCCAGTCGC GCGCCGGTGA GGCGATTGCC GGCAAGTACA TCATCGTGCT CAAGGACGGC
ACGATGCAGA TGAGCGCGAG CAGCGACTAC GCGACCCGCC AGGGCCACGC CCGCAGCGCG
GCGGCGTCGG TGCTGGCCCG CCACGGCCTG CCCGAGGCCG CGATCGACCA CGCCTACGGC
AACGCCCTGC AGGGCTTCTC CGCGCGCCTC AGCGCCCAGG AGGCCAAGGC CCTGGCCGCC
GATCCCGCGG TCGCCATCCT CGAGCAGGAC CGCATCATCG AGCTCTTCGC CCCTCCCGGA
TGCCATCCCA AGAAGGGCTG CGATGACGGC GGCGGTGACG GCGGCGGCGG CAGCCAGAAC
ACGCCCTACG GCATCACGCG AGTCGGCGGC GGCAACGGCC CGGGCAGCGG CACGGCCTGG
GTCATCGACA CCGGTATCGA CCTCGACCAC GAGGATCTCA ACGTGGACGT GAGCCGCGCG
GCCGACTTCG TCGGCGGCTC GGGTGACGAC GGCAACGGCC ACGGCACGCA CGTGGCCGGC
ACCATCGCCG CCCTCGACAA CGGCCTCGGC GTCATCGGCG TCGCCCCCGG AGCCCCCGTG
GTCCCGGTCC GCGTCCTCGA CAACCGCGGC AGCGGCACCA CCTCGGGCGT CATCGCCGGC
GTCGATTACG TCGCGGCCAA CGCCAGCAAC GGCGACGTGG CCAACATGAG CCTCGGCGGC
GGCGTGTCCT CGGCCCTCGA CAGCGCGGTC GTCAACTGCG CCCAGTCCGG CGTCAAGATC
GCGCTGGCCG CGGGCAACAG CTCGACCGAC GCCAACAACT CGTCGCCGGC CCGCGCCAAC
GGTGCGAACA TCTACACCGT CTCGGCCATC GACTCGAACG ACAACTTCGC CTCGTTCTCG
AACTTCGGCA ACCCGCCCGT GGACTTCGCC GCCCCCGGCG TCGCGGTCGA GTCGACCTAC
AAGAGCAACG GCTACGCCTC GCTCAGCGGC ACCTCGATGG CGGCGCCCCA CGTGGCCGGC
CTGCTGCTGC TCGGCAGCGT GCGCAGCGAC GGCAACGCCA ACGGCGACCC CGACGGCAAC
CCCGACCCCA TCGCCCACAA CTGA
 
Protein sequence
MHKLFSFAVL PAAGAAALLL ASGCQTDTSA WETEQAEEAL VQSRAGEAIA GKYIIVLKDG 
TMQMSASSDY ATRQGHARSA AASVLARHGL PEAAIDHAYG NALQGFSARL SAQEAKALAA
DPAVAILEQD RIIELFAPPG CHPKKGCDDG GGDGGGGSQN TPYGITRVGG GNGPGSGTAW
VIDTGIDLDH EDLNVDVSRA ADFVGGSGDD GNGHGTHVAG TIAALDNGLG VIGVAPGAPV
VPVRVLDNRG SGTTSGVIAG VDYVAANASN GDVANMSLGG GVSSALDSAV VNCAQSGVKI
ALAAGNSSTD ANNSSPARAN GANIYTVSAI DSNDNFASFS NFGNPPVDFA APGVAVESTY
KSNGYASLSG TSMAAPHVAG LLLLGSVRSD GNANGDPDGN PDPIAHN