| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5309 |
|---|
| Symbol | |
|---|
| ID | 8547721 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 7302299 |
|---|
| End bp | 7303978 |
|---|
| Gene Length | 1680 bp |
|---|
| Protein Length | 559 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 646389983 |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003269687 |
|---|
| Protein GI | 262198478 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCATC AATACGTATA TGTGATGAAG GACCTGCGCA AGCTGGTCCC CCCCAAGCGC
GAGATCCTCA AAGGTCTCTG GCTGTCCTTC TTGCCCGGCG CCAAGATCGG CGTTCTCGGC
GCCAACGGCG CCGGTAAGAG CTCCCTGCTG CGCATCATGG CCGGCGTGGA CCAGGAGTTC
CAGGGCGAGG CGTGGGCGGC CGACGGCGTC AAAATCGGCT ACCTGGCCCA GGAGCCCGAG
CTCGACCCGG ACAAAGACGT GCGCGGCAAT GTCGAGGAGG CGGTCGCCGA GGTGCGCGAC
CTGCTCGACC GCTTCGAGGC CGTGAGCGCG CGCTTCGCCG AGGAGCTCAC CGACGATCAG
ATGAACGAGC TGCTCGAGGA GCAGGGCAAG CTGCAGGACG CCATCGACGC GTCCAACGGC
TGGGATCTCG ACCACACCAT CGAACGCGCC ATGGACGCGC TGCGCCTGCC CCCGGCCGAC
GCCGACGTCA CCCAGCTCTC GGGCGGTGAG CGCCGCCGCG TGGCGCTGTG TCGCCTGCTC
CTGTCCAAGC CCGACATGCT GCTGCTCGAC GAGCCCACCA ACCACCTCGA CGCCGAGTCG
GTGGCCTGGC TCGAGCGCTT TCTCGAGAAC TTTCCCGGCA CCGTCGTGGC CGTCACCCAC
GATCGCTACT TCCTCGACAA CGTGGCCGGC TGGATCCTCG AGCTCGACCG CGGCGAGGGC
CTCCCCTTCG AGGGCAACTA CTCGGCCTGG CTCGAGTACA AGGCCAAGCG CCTGGCCCAG
GAGGAGAAGC AGGACAGCGC CCGCCAGCGC ATCCTGTCGC GCGAGCTCGA CTGGGTGCGC
ACCGCGCCCA AAGCGCGCCA CGCCAAGAGC AAGGCGCGCC TGGGCCGCTA CGAGGAGATG
CGCGCCGAGG CCGAGTCCGA GAAGCGCGAT CCCGCGCTCG AGATCGTGGT CCCGCCGGGT
CCGCGTCTGG GCGACGAGGT GGTGCGCGCC GAGGGCGTGC GCAAAGCCTA CGGCGACAAC
CTGCTGGTCG AGGACCTCAA CTTCCGCCTG CCGCGCGGCG GCATCGTCGG CATCATCGGC
CCCAACGGCG CCGGCAAGAC CACGCTGTTC CGCATGATCA CGGGCCAGGA GCAGCCCGAC
GAGGGCAAGC TGATCGTCGG CGACACCGTG CAGATCTCGT ACGTCGACCA GTCGCGCGAC
GCCCTCGATC CCGACGCCAC GGTGTGGCAG GAGATCTCGG ATGGCGCGGA GTTCCTCGAG
ATGGGCAAGC GCCAGGTGCC CTCGCGCGCC TACGTGTCGA GCTTCAACTT TCGCAGCCAG
GACCAGCAGA AGCGCGTCGG CATGCTCTCG GGCGGTGAGC GCAATCGCGT GCACCTGGCC
AAGATGATCC GCACCGGCGG CAACCTCTTG CTGCTCGATG AGCCCACCAA CGACCTCGAC
GTCGAGACCC TGCGCGCGCT CGAAGACGCG CTCCTGCGCT TCCCGGGCTG CGCCGTGGTC
ATCAGCCACG ATCGCTGGTT CCTCGACCGC ATCGCCACCC ACATCCTGGC CTTCGAGGGC
GACAGCCAGG TGGTCTGGTT CGAGGGCAAC TACCGCGACT ACGAGGCCGA TCGCCGGCGC
CGCCTGGGCA CCGACGCCGA TCAGCCGCAC CGGATCAAAT ACCGCAAGCT CACGCGCTGA
|
|---|
| Protein sequence | MAHQYVYVMK DLRKLVPPKR EILKGLWLSF LPGAKIGVLG ANGAGKSSLL RIMAGVDQEF
QGEAWAADGV KIGYLAQEPE LDPDKDVRGN VEEAVAEVRD LLDRFEAVSA RFAEELTDDQ
MNELLEEQGK LQDAIDASNG WDLDHTIERA MDALRLPPAD ADVTQLSGGE RRRVALCRLL
LSKPDMLLLD EPTNHLDAES VAWLERFLEN FPGTVVAVTH DRYFLDNVAG WILELDRGEG
LPFEGNYSAW LEYKAKRLAQ EEKQDSARQR ILSRELDWVR TAPKARHAKS KARLGRYEEM
RAEAESEKRD PALEIVVPPG PRLGDEVVRA EGVRKAYGDN LLVEDLNFRL PRGGIVGIIG
PNGAGKTTLF RMITGQEQPD EGKLIVGDTV QISYVDQSRD ALDPDATVWQ EISDGAEFLE
MGKRQVPSRA YVSSFNFRSQ DQQKRVGMLS GGERNRVHLA KMIRTGGNLL LLDEPTNDLD
VETLRALEDA LLRFPGCAVV ISHDRWFLDR IATHILAFEG DSQVVWFEGN YRDYEADRRR
RLGTDADQPH RIKYRKLTR
|
|---|
| |