Gene Hoch_5308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5308 
Symbol 
ID8547720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7300914 
End bp7302122 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content66% 
IMG OID646389982 
Productphosphate-selective porin O and P 
Protein accessionYP_003269686 
Protein GI262198477 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGTA CCCAGGCGTA TTTTGTTGGC TTATTGAGCT CGCTGCTGCT CGTTCCGGCA 
GCGCACGCGC AGTCCGAGGA TGGCGGCGAG CTGCCGATGC CCGGCAATGT GGCGGCGGAG
CAGGCGCTGC CCACCGAGCC CGGCATCGAG GTCGAGTATA ACAAGGGACT CAAGTTCTCG
AGTTCCGATG GCGATTACCA GCTCAAGCTG CGGATTCGCA ATCAGTTCCT CATGGAGGTC
GCGCGCACCG AGGCCGCCGA TGAGTTCGAG GCCAACTTCT CGATTCCGCG CATGCGCTTG
CAGTTCGGCG GCCACGCCCT GGGCGAGGCC AACGCCTATA AGGTCGAGTT CGACGTCTCG
AGCTCGGGGA ATCCCGCGCT CAAGGACGCC TTCTACGAGC GCACGGTTTC GCCGGCCCTG
AAGCTGCGCC TCGGCCAGTT CAAGCGGCCC TTCAGCCGCC AGGAGATCGT CTCCGACTTC
GGCAGCGAGT ACATCGGCCG CGCCATCACC AACCGCTTCG GCGGCGCGGG TCGCGACCTC
GGTATCATTG CTCACAATGG GTACGACAAG TCGCCCGACG GGCTCGAGTG GGCCTTTGGC
GCCTTCAACA GCACCGGTGA CCGCGCCCGT CAGGGCCTCG ACTGCGACGA TCCGAGCGAC
GCCTCCACCT GCACCCCGAG CCGTCCCAGC ACTGTGCCCG ACGATTTCGG ACCGCTGGTC
GTCGGCCGCC TGGCCTACAA CTACGGCGGC ATCAAGGGCT ACTCCGAGGG CGACCTCGAG
GGCGGTCCGC TGCGCTTCTC GGTCGGCGCG AGCTACAAGA ACGACCTGCG CGACCTCGAC
GAGGACGCCG CCGGCGAGCT GGCCATGGAG CACGCGGCCG AGCTCGACTT CATCGTCAAG
GCCTACGGCT ACAACCTCTC GGGCGGGCTG TACATGGTCA AAGAGGGCGC GGCCGACGCG
CTGCTCGGCT TCTACGCCCA AGGCGGCGCC ATGCTGGTGC CCGACACCTT CCTCGCCGCG
CTGCGCTTCG CCACCATCGA CCTCGAGGGC GACGGCTCGC GCCGCGAGAT GCTCGTCGGC
GTCAACTGGT TCTTCGTTCG CGGTCACGCC TTCAAGTTGA TGCTCGACGG CGGCGTGCTG
CAGACCTCGG TGGCCGACAG CACCGCCACC GACCTGCTGT TCCGCACGCA GTTTCAGTTC
GAGTTCTGA
 
Protein sequence
MNRTQAYFVG LLSSLLLVPA AHAQSEDGGE LPMPGNVAAE QALPTEPGIE VEYNKGLKFS 
SSDGDYQLKL RIRNQFLMEV ARTEAADEFE ANFSIPRMRL QFGGHALGEA NAYKVEFDVS
SSGNPALKDA FYERTVSPAL KLRLGQFKRP FSRQEIVSDF GSEYIGRAIT NRFGGAGRDL
GIIAHNGYDK SPDGLEWAFG AFNSTGDRAR QGLDCDDPSD ASTCTPSRPS TVPDDFGPLV
VGRLAYNYGG IKGYSEGDLE GGPLRFSVGA SYKNDLRDLD EDAAGELAME HAAELDFIVK
AYGYNLSGGL YMVKEGAADA LLGFYAQGGA MLVPDTFLAA LRFATIDLEG DGSRREMLVG
VNWFFVRGHA FKLMLDGGVL QTSVADSTAT DLLFRTQFQF EF