| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5301 |
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| Symbol | |
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| ID | 8547713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 7288439 |
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| End bp | 7290823 |
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| Gene Length | 2385 bp |
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| Protein Length | 794 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646389975 |
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| Product | cysteine-rich repeat protein |
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| Protein accession | YP_003269679 |
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| Protein GI | 262198470 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02232] Myxococcus cysteine-rich repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCATA TTCGGGCCGG CGTCGGATTT GTCTGGCGCG CGGTCGCGGT GGCGCTGTTG
TTCGCGGCCG GCGCGTGCAT CGACGACGGC AGCGTGCTGT GCCCGGGCGC CGACGGCATC
CGCTGCCCGG CGAGCCTCGT GTGCACGGCC GACGGCACCG GCTGCCGGAT TCCCGGCAGC
TCGTGCGGCG ACGGCGTGGT CGAGCCCGGC GAAGGCGAGG TCTGCGACGA CGGCAACGTC
GAGTCGGGCG ACGGCTGTCG CGGCGACTGC GCATCCAACG AACGTTGCGG CAACGGCACC
GTGGACGCCA TCAGCGACAA CACCGCCGGC TTCGAGGAGT GCGACGCCGG CGAGCTCAAC
TCCGACGACA TCGGCCTGTG CACCCTGGAC TGCACGCTCA ACTGCGGCGA CGGCGAGCAC
GACTACCTCG AGGAGTGCGA CGACGCGGTG TTCGACTCCA TCTGCCTCGA CTACGGCTTC
GACTGGGGCG CCACCGCGTG CACGCGCTGC GTCGCCGATC TCGACGACTG TGGCCGCATC
GACTGGGAGC GCTCGAGCGA CGTGGCCGGT ATCGGCGTGC TCAACGCGGT GTGGGGGCTG
GGACCCGGGC TGCTCTTCGC CGCGGGCGCC AACGACGACG GCACCCGCGA CGCCATCGTG
CGTTACGACC CGGCGCGCAA TCTGTGGGTG TCGGCGGGAG CGCCGACCCG GGCCGGCGCC
TTTCACGGCA TCTGGGGCCT GGGCGATGAC GAGGTGTACT TCGTCGGTGA GTTGGGCCGC
GTCTTGCTGT ACGACGGCGT CGGCTGGCAG GCGCTCGAGA CCGGTGTGGA GTACGCGCTG
CGCGCGGTCT GGGGCAGCTA CCTCAAGGGC GAGGCGCTGC TGTTCGCCGC CGGCGACAGC
GCCGCGATCC TGCGCTACGA CGGCCGCACC TGGCGCGACG AAGCGCTGCC CGCCGAGCTC
CCCGACGACG CGCGCATCGC GGCCTTGTGG GGCAGCAGCC CGCGCGACGT GTACGCGGTC
GGCGGCGCGG GCCTGATCCT GCACTACGAC GGCGAGCGCT GGGTGCGCGA GGCCGCCGGG
CTCACCGGCG CGGACCTGCG CGACATCTGG GGCAGCGAGG GCGAGGTGTT CGCGGTCGGC
AGCGAAGGCG TGGTGCTGCA CTACGATTCG GACGGCTGGA CGATCATGGA CGAGGTGCGC
GGACCCGACA CCAACCTGCC CGAGAGTCGC CCGATGCCCA CGCTCTACGC GGTGTGGGGC
AGCGCGCCCG ACCACGTGGT CGCGGTCGGC GATCAGCTCA CCATGCTGGT CTACGACGGC
AACTCGTGGT CGCGCTTGAA CTCGGCTACC GATGCCCTGG TGCGCGATCT GTGGGGCCTG
CGTGAGTTCG GCTTGCTCGG CGTCGGCGAG CGCGACCAGG TCTTCCGGCA CTACGGTTGG
TCGCGGCCAT CGCGGCTGGC GCGCCCGCTG TTTGCCGAAA TCATCGATCT CTGGGGCCGC
GCCAGTGACG ACATCCTGGC GCTGACCAGC CGCGAGCCCT TCCTCATCCA CTTCGACGGC
ACCGAGTGGC GCGCGCTCGA GGAGAACCAC CCCGAGCTCA TGATTCTGCT GCCCGACAAA
GACGACGGCA CCACGCCGCT GCGCGACATG TGGGGCGATG CCGAGGGCGT CATCCACGCG
GTCGGCGACG ACAGCCTGAT CCTGCGCTAC CAGCCCGGCG AAGGCTGGAC GCAGGTCGCC
CTGGACGCCT CGGTGCCGCG CCGTGGGCTC AACAGCGTGT GGGGCACCGA GGCGGGCGAG
CTGTACGCGG TCGGCGAGGC GGTCGAAGGC GAGCCGGCGC TGATCCTGCA CTACGACGGC
AGCGCCTGGA CGCAGATGAG CAACGGCGCG ACCGCGACCC TGCACAGCGT GTGGGCGCAC
GACAAGCGCG CCTTTGCCGT GGGCGAGAAC GGCACGATCC TCACCTACGC AGCCGAGGAC
GGCGGCATCT GGACGCACAT GAACTCGCCG ACCCGCGAAC CCCTGTACGG CGTCTGGGGC
GCGGGCCAGG GCCTGGTGCG CGTGGTCGGC GCGGAGGGCA CCTTGCTGGT TTACGCTCCC
AGCACCGGCT GGGCGCACGT CGAGGCGCCG TCGGTGGGGG CCGAGGACCT GTACGCCATC
TGGGGCAGCG ACGCCGAGCA CGTGTTCGCG GTGGGCGCTG AGGGCACGCT GCTCTTCGAT
AATGGCGACG ACGGCTGGAC CCCGGTGCGC GTGGGCACCG ATCGCACCCT GCGCAGCGTC
TGGGGCGTGC GCTCGACCGG GAATCACCTG CGCGCGGTCA TGGTCGGCGG CGACGCGGGC
GCCTTCGACC ACCTGTTCAT CACCGATAGC TCGACCTTTC CCTGA
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| Protein sequence | MRHIRAGVGF VWRAVAVALL FAAGACIDDG SVLCPGADGI RCPASLVCTA DGTGCRIPGS
SCGDGVVEPG EGEVCDDGNV ESGDGCRGDC ASNERCGNGT VDAISDNTAG FEECDAGELN
SDDIGLCTLD CTLNCGDGEH DYLEECDDAV FDSICLDYGF DWGATACTRC VADLDDCGRI
DWERSSDVAG IGVLNAVWGL GPGLLFAAGA NDDGTRDAIV RYDPARNLWV SAGAPTRAGA
FHGIWGLGDD EVYFVGELGR VLLYDGVGWQ ALETGVEYAL RAVWGSYLKG EALLFAAGDS
AAILRYDGRT WRDEALPAEL PDDARIAALW GSSPRDVYAV GGAGLILHYD GERWVREAAG
LTGADLRDIW GSEGEVFAVG SEGVVLHYDS DGWTIMDEVR GPDTNLPESR PMPTLYAVWG
SAPDHVVAVG DQLTMLVYDG NSWSRLNSAT DALVRDLWGL REFGLLGVGE RDQVFRHYGW
SRPSRLARPL FAEIIDLWGR ASDDILALTS REPFLIHFDG TEWRALEENH PELMILLPDK
DDGTTPLRDM WGDAEGVIHA VGDDSLILRY QPGEGWTQVA LDASVPRRGL NSVWGTEAGE
LYAVGEAVEG EPALILHYDG SAWTQMSNGA TATLHSVWAH DKRAFAVGEN GTILTYAAED
GGIWTHMNSP TREPLYGVWG AGQGLVRVVG AEGTLLVYAP STGWAHVEAP SVGAEDLYAI
WGSDAEHVFA VGAEGTLLFD NGDDGWTPVR VGTDRTLRSV WGVRSTGNHL RAVMVGGDAG
AFDHLFITDS STFP
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