Gene Hoch_5292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5292 
Symbol 
ID8547704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7277606 
End bp7278808 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content74% 
IMG OID646389966 
ProductUDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase 
Protein accessionYP_003269670 
Protein GI262198461 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0707] UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 
TIGRFAM ID[TIGR01133] undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGATCG CCGGTGGTGG CACCGGCGGT CATCTCTTTC CCGGCGTGGC AGTGGCCGAG 
GCGCTGCGCG CGCGCGCGCC CGAGGCCGAG ATTCACTTCG TCGGCACCGA GCGCGGCATC
GAGGCCCGGG TGCTGCCCGA GCTGGGCTGG CCGCTGTCCT TCATCGAGGT GAGCGGTCTC
AAGACCGTGG GCATCGGCGG CGCCGTGCGC GGTCTGGCGC GCATTCCGCG GGCCATGATG
CAGTCGCGCG CGCTGCTGCG CGAGCTGGCG CCCGAGGTCG TCCTCGGCGT CGGCGGTTAC
GCCTCCGGCC CGGTGGTGCT GGCCGCGCGC ATGCAGGGCT TGCCCACCGC CATCCTCGAG
CAGAACTCCA TCCCGGGACT GACCAACCGC ATTCTCGGAC GCGTGGTCGA TGCGGTGTTT
CTCTCCTTCG CCAGCAGCGA GCGCTTCTTC CCCGCGCGCC GCGTGATCGC CAGCGGCAAC
CCCATCCGCC AGGCGCTGCT GCGCACGCTC GGCGAGGTCG CGGCGGCGTC ACCGGCAGCC
CCCGAGGCCA CGGGGGCTGG CTCGGCGTCG GGCGCTGACG CGAGCGCGAG CGGCGCGGAC
GGCGCCGGCG GTGCGAGCGG CGCCGGCGAT ATCGTCGATG CGTCCGAAAT CGTCCGTGTG
CTGGTCTTTG GCGGCTCGCA GGGCGCGCGT GCGCTCAACG AGCTGGTGCC GGCCGCAGCC
GCGCTGCTGG CCGCGCGCGG GTTGCGCTGC AGCATCGAGC ATCAGACCGG CGCGGCCGAG
CTCGAGGCGA CGCAGGCGCG CTACGCCGAA GCCGGCCTGG ACGCGCGCTG CAGCGCCTTC
ATCCGCGACA TGGCCACAGC CTATCGCGGC GCCGATATCG TGGTCGCCCG CGCCGGCGCG
ACCACGGTGG CCGAGCTCGG CATCGTCGGT CGCCCGGCCG TGCTCATCCC CTACCCCTAC
GCGGCCGACA ACCACCAGGA GCTCAACGCC GAGGCCCTGG TCGAGGCCGG CGCCGCGCGC
CTGCACCGGC AGGCCGAGCT GACGCCCGAG GGGTTGGCCG ACACCTTGTC CGAACTCATC
ACCACGCCCG TGCTGCGGGC GCAGATGGCG GCGGCCATGC AGTCACTCGG CCGGCCCGAG
GCCGCCGATA CCGTGGCCGC CTGGTGCGCA GACCAGGCCG ATCAGCGCGC GGCCAGGCGC
TGA
 
Protein sequence
MLIAGGGTGG HLFPGVAVAE ALRARAPEAE IHFVGTERGI EARVLPELGW PLSFIEVSGL 
KTVGIGGAVR GLARIPRAMM QSRALLRELA PEVVLGVGGY ASGPVVLAAR MQGLPTAILE
QNSIPGLTNR ILGRVVDAVF LSFASSERFF PARRVIASGN PIRQALLRTL GEVAAASPAA
PEATGAGSAS GADASASGAD GAGGASGAGD IVDASEIVRV LVFGGSQGAR ALNELVPAAA
ALLAARGLRC SIEHQTGAAE LEATQARYAE AGLDARCSAF IRDMATAYRG ADIVVARAGA
TTVAELGIVG RPAVLIPYPY AADNHQELNA EALVEAGAAR LHRQAELTPE GLADTLSELI
TTPVLRAQMA AAMQSLGRPE AADTVAAWCA DQADQRAARR