| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5290 |
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| Symbol | |
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| ID | 8547702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 7274505 |
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| End bp | 7276148 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 646389964 |
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| Product | thiamine pyrophosphate protein domain protein TPP-binding protein |
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| Protein accession | YP_003269668 |
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| Protein GI | 262198459 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCAT CCGACTTATT CGTTAAAGCG CTCGAAGCCG AAGGTGTGGA ATACGTCTTC
GGCGTCCCCG GTGAGGAAAA TCTCGATTTC CTCGCCTCCC TCCAGAACTC GTCTATCAAG
CTGGTGCTCA CCCGGCACGA GCAGGGCGCC GGCTTCATGG CCGCCACCTA CGGACGCCTC
ACCGGCAAAC CCGGCGTGTG CTTGTCCACG CTCGGCCCGG GCGCGACCAA CCTGGTCACG
GCCGCCGCCT ACGCCCAGCT CGGCGGCCTG CCGATGTTCA TGCTCACCGG CCAGAAGCCG
ATCAAGACCA GCAAGCAGGC GCAGTTTCAG ATCGTCGACG TGGTCGACAT GATGCGCCCG
CTGACCAAGT ACACGCGCCA GATCGTGAGC GCCGACTCCA TCCCCTCGCG GGTGCGCGAG
GCCTTTCGCC TGGCCCAGGA GGAGCGGCCC GGCGCCGTGC ACCTCGAGCT GCCCGAGGAC
ATCGCGGCCG AAAACAGCGA GGCCGGCGTC ATCCAGGCCA GCCAGGTGCG GCGGCCGGTG
GCCGAGGACA AGGCCATCAA GTCGGCGGTC GAGCTCATCG AGAAAGCCTC GCATCCGCTG
CTGCTCATCG GCGCGGGCGC CAACCGCAAG CTGACCTCGC GCATGCTGCG GCAGTTCATC
GACAAGACCG GGATTCCCTT CTTCAGCACG CAGATGGGCA AAGGCGTCAT CGACGAGCGC
GACCCACTGT ACCTGGGCAA CGCGGCGCTG TCCGACAACG ACTTCCTGCA CCGGGCGATC
GAGCACGCCG ACTTGATCAT CAATGTCGGA CACGACGTCG TCGAAAAACC GCCCTTCTTC
ATGCACCGCG AGTCCAAGCT CAAGGTCATC CACGTCAACT TCTCGAGCGC CAACGTCGAC
CCCGTGTACT TTCCGCAAGT GGAAGTGGTC GGCGACATCG CCAACAGCAT CTGGCAGATC
AAAGAGCGCA TGCTCAAGCA GAGCACCTGG GACTTCTCCT ACTTCCTGAA GGTCAAGGAG
CGCCTCGAGA TGCACCTGCG CGAGGGCGTG GACGACTGCG CCTTCCCGGT GCAGCCGCAG
CGCCTGGTCG CCGACGTGCG CCGGGCCATG CCCGAGAGCG GCATCATCGC GCTCGACAAC
GGCGTGTATA AGATCTGGTT TGCGCGCAAC TACTGGGCCT ACGGACCCAA CACCGTGCTG
CTCGACAACG CGCTCGCGAC CATGGGCGCC GGCCTGCCCT CGGCCATGGC GGCCAAGCTG
GTGTATCCCG ATCGCAAGGT CATGGCCATC TGCGGCGACG GCGGCTTCCT GATGAACTCG
CAGGAGCTCG AGACCGCGGT GCGCCTCAAG CTCGACGTGG TGGTCATGAT CCTGCGCGAC
GACGCCTACG GCATGATCAA GTGGAAGCAG ACCGCCATGG GCCTGGGCGA CTACGGCCTG
GACTTCCAGA ACCCCGACTT CGTCAAGTAC GCCGAGAGCT ACGGCGCCCA CGGCCACCGG
CTCGAGCGCA CCGAAGACCT GCAGTCGCTG GTCGAGCGCT GCCTGAGCAC CCCGGGCGTG
CACGTCATCG ACGTGCCCGT GGACTACTCG AGCAACGACC GCATCCTCAA CCGCGAGATC
AAAGAGAAGA GCAAACAGCT CTGA
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| Protein sequence | MKASDLFVKA LEAEGVEYVF GVPGEENLDF LASLQNSSIK LVLTRHEQGA GFMAATYGRL
TGKPGVCLST LGPGATNLVT AAAYAQLGGL PMFMLTGQKP IKTSKQAQFQ IVDVVDMMRP
LTKYTRQIVS ADSIPSRVRE AFRLAQEERP GAVHLELPED IAAENSEAGV IQASQVRRPV
AEDKAIKSAV ELIEKASHPL LLIGAGANRK LTSRMLRQFI DKTGIPFFST QMGKGVIDER
DPLYLGNAAL SDNDFLHRAI EHADLIINVG HDVVEKPPFF MHRESKLKVI HVNFSSANVD
PVYFPQVEVV GDIANSIWQI KERMLKQSTW DFSYFLKVKE RLEMHLREGV DDCAFPVQPQ
RLVADVRRAM PESGIIALDN GVYKIWFARN YWAYGPNTVL LDNALATMGA GLPSAMAAKL
VYPDRKVMAI CGDGGFLMNS QELETAVRLK LDVVVMILRD DAYGMIKWKQ TAMGLGDYGL
DFQNPDFVKY AESYGAHGHR LERTEDLQSL VERCLSTPGV HVIDVPVDYS SNDRILNREI
KEKSKQL
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