| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5287 |
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| Symbol | |
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| ID | 8547699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 7267105 |
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| End bp | 7270905 |
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| Gene Length | 3801 bp |
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| Protein Length | 1266 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 646389961 |
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| Product | methionine synthase |
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| Protein accession | YP_003269665 |
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| Protein GI | 262198456 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.212227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCGC GGAGCGACGG GAGCATCAGC GTGCCCACAG TGGGCCGCAG GAGCGCGTTC
CCGGGCGATT TCGAGCTACC CCTGGAACTC GACGGCGTTT CCGTGCAATC TAGCCAACAC
ATGGCGAGTA ACGAAGAGAC AACCACGGCC CTCCTCCACA AACTCATGCG CGAACGCATC
CTCGTGATCG ACGGCGCGAT GGGGACGATG ATTCAGCGCC AGGGTCTCGA CGAGGATGAC
TACCGCGGCA CGCGATTCCA GGATCACCCC TCGTCGCTCA AGGGGTGTAA CGACCTGCTC
GGCCTCACCC AGCCGAAGCT CATCGAGGAG CTGCATCTGC AGTTTTTGCG CGCTGGCGCC
GACATCATCG AGACCAACAC CTTCAACGCC AACGCCGTCG CCATGGCCGA TTACGCCATG
GAGGCGCAGG TGCGTGAGAT GAATCTGGCA TCGGCTCAGG TCGCCCGGCG CGCAGTCGAG
CGCTTTGCCA GCGAGAGCGA GCGCGTGTGC ATGATCGCCG GCTCCATGGG CCCGACGACC
AAGACCGCGT CGCTGTCGCC CGACGTCAAC GACCCGGGCG CGCGCGGTAT CACCTACGAC
GAGCTGGTGA CGATCTATTA CGAGCAGGCG CAGGCGCTGC TCGAGGGCGG CGTCGACCTG
CTGCTGGCGG AGACCTCGTT CGACACCCTG AACATGCGCG CGGCGCTGTT CGCCATCCAG
AAGCTGTTCG CCGACGGCGG CCGCCGGGTG CCGGTGATGT CCTCGGCGAC CATCACCGAC
CGCAGCGGGC GCACGCTCTC GGGCCAGACC ATCGCCGCCT ACTATCAGTC GGTGGCCCAC
GTCGACCTGA GCTACATCGG CATCAACTGC GCGCTCGGCG CCGACGAGAT GCGCCCCTAT
GTCGAGGAGC TGGCCGGGCT GTCGCGCTTC CCGGTGGCCT GCGTGCCCAA CGCCGGGCTG
CCCAACGAGC TCGGCGAGTA CGACGAGACC CCCGAGAGCA TGGGCGCCCT GCTCGGCGAA
TTCGCCAACA ACGGCTGGCT CAACTTCGCC GGCGGCTGCT GCGGCACCCG CCCCGAGCAC
ATCGCCGCCA TCGCCGACGC GGTGGCCGGT GTCGCGCCGC GCAAACCGGC TGAGCCCAAG
CCCTTCACCA GCCTCAGCGG CCTCGAGCCG CTGGTGATCA CGCCCGAGTC GAACTTCACC
ATGATCGGCG AGCGCACCAA CGTCACCGGC TCGCGCAAGT TCAAGCGCCT GATCATGAAC
GATCACTACG AGGAGGCCGT GGAGGTGGCG CGCCAGCAGG TCGAGGGCGG CGCCAACATC
ATCGACGTGT GCATGGACGA GGGCATGCTC GAGTCCGAGG CGGCGATGAC GCGCTTCCTC
AACCTGATCG CGGCCGAGCC CGACATCGCG CGCGTGCCGG TGATGATCGA CAGCTCCAAG
TTCACGGTCA TCGAGGCCGG GCTCAAGTGC ATCCAGGGCA AGGGCGTGGT CAACTCGATC
AGCCTCAAAG AGGGCGAGGA GGCCTTCAAG GAGCACGCCT CGCTGATCCG CCGCTACGGC
GCCGCGGTCG TGGTCATGGC CTTCGACGAG ACCGGCCAGG CGACCACGGT CGATCACCGC
CTCACCATCG CCCGCCGCGC CTACCGCATC CTCACCGAAG AGCTCGGCTT TCCGCCCGAG
GACATCATCT TCGACCCCAA CATCCTCACC GTGGGCACCG GCATCGAGGA GCACGCCGAC
TACGCCGTGA GCTTCATCGA GGCGGTGCGC CAGATCAAAG CCGAGATGCC GCTGTGCAAG
GTCAGCGGCG GCGTGAGCAA CATCTCGTTC TCGTTCCGCG GCAACGATCC GGTGCGCGAG
GCCATGCACG CGGCCTTCCT GTACCACGCG ATCAAGGCCG GGCTCGACAT GGGCATCGTC
AACGCCGGCC AGCTCGAGGT CTACGACGAG ATCGAGCCCG AGCTGCGCGA GCGCGTCGAG
GACGTGCTGC TCAACCGCCG CGCCGACGCC ACCGAGCGGC TCATCGACTT CGCCTCCAGC
TACACGCGCG AGGAGACCGA GAAGCAGGAC GTCAAGCAGT GGCGCACGGG CACGCTCGAG
GAGCGCATGT CGCACGCGCT GGTCAAGGGC ATCGCCGACC ACGTGGACGA AGACGTCGCC
GAGGCGCTCG AGAAGTATCC CTCGCCGCTG TCGATCATCG AGGGCCCGCT CATGGACGGC
ATGAACGTGG TCGGCGGGCT GTTCGGCGAG GGCAAGATGT TCCTGCCCCA GGTGGTCAAG
AGCGCGCGCG TGATGAAGAA GGCGGTGGCC ATCCTCGAGC CGCTCATGGA AGAGGAAAAG
CGCAAGAGCG GCAAGACCCA CGCCAAGGGC AAGATGGTCA TCGCCACGGT CAAGGGCGAC
GTCCACGACA TCGGCAAGAA CATCGTCGGC GTGGTGCTGC GCTGCAACGG CTACGAGGTC
GAGGACCTGG GCGTGATGGT CCCGGCCAAG CAGATCCTCG ACGCCGCGCG CGAGATGAAG
GCCGACGTGG TCGGTCTCAG CGGCCTGATC ACGCCCTCGC TCGACGAGAT GATCCACGTC
GCCAAGGAGA TGAAGCGGCT GAAGATGAAC ATCCCGCTGC TCATCGGCGG CGCCACCACC
TCGGGCAAGC ACACGGCGGT CAAGATCGCG CCGGTCTACG ACGGCCCCTC GGTGCACGTG
GGCGACGCCT CGCTGGCCGT GGGCGTGCTC GGCAAGCTGC TCAGCAGCAC CCAGCGCGAC
GGGTTCGTGG CCGCCAACGC CGACAAGCAG GCGACCTTGC GCGAGAACTT CGAGCGCACC
CAGAAGCAGC GCACGCTGCT GCCGCTGGCC GAGGCGCGCG CGCGCAAAGT CGAGGTCGAG
TGGCGCGCCG AGGATGTGGC TAAGCCCGCC TTCGTCGGCA CGCGCACGCT CACCGAGGAC
GACATCCCGG TGAGCGATCT GGTGCCGTGG ATCGACTGGT CGCCCTTCTT CCACGCCTGG
GAGCTCAAGG GCCTGTACCC GGCCATCCTC GACCACGAGC GCTACGGCGA GCGCGCCCGC
GAGCTGTTCG ACGACGGCCA GAAGCTGCTG CGCCGCATCT GCGACGAGAA GCTCCTGCGC
GCCCGCGGCG TGTACGGCTT CTTCCCCGCC GCCAGCGAGG GCGAGGACAT CGTCATCTAC
GACCAGGAGC GCGAGAACGA GCGCGCGCGC TTCTACTTCC TGCGCCAGCA GGAGGACAAG
CGCCCGTGCT TCTGCCTGGC CGACTACGTG GCCCCGGCGT CGTCCCAGCT CCAGGATCAC
ATCGGCGGCT TCACGGTCAC CGCCGGCCTG GGCACCGACG AGCTGGTCGC CGAGTTCGAG
CGCGACCACG ACGACTACCA GGCCATCATG GTCAAAGCCC TGGCCGACCG CCTGGCCGAA
GCCTTCGCCG AGATGCTGCA CAAGCGCGTG CGCGACGAGT GGGGCTACGG CAAGCAGGAG
GACATCGACT TCCAGAGCGT GCTGTCCGAG AACTACCGCG GCATCCGGCC GGCCTTTGGC
TACCCGGCCT GCCCCGACCA CAGCGACAAG AGCACGCTGT TCTCGCTGCT CGACGCGACC
GAGGCCACCG GCGTGAGCTT GACCGAGAGC ATGGCCATGA CCCCGACCGC GGCGGTCAGC
GGCATCTACC TCGGACACCC GCAGTCGCGC TACTTCGCCG TGCGCCGCCT GGGCCGCGAC
CAGGTCGAGG ACTACGCCGC GCGCAAAGGC ATCTCGCGGC AAGAGGCCGA GCGCTGGCTC
GCCCCCTACC TCACCTACTG A
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| Protein sequence | MAARSDGSIS VPTVGRRSAF PGDFELPLEL DGVSVQSSQH MASNEETTTA LLHKLMRERI
LVIDGAMGTM IQRQGLDEDD YRGTRFQDHP SSLKGCNDLL GLTQPKLIEE LHLQFLRAGA
DIIETNTFNA NAVAMADYAM EAQVREMNLA SAQVARRAVE RFASESERVC MIAGSMGPTT
KTASLSPDVN DPGARGITYD ELVTIYYEQA QALLEGGVDL LLAETSFDTL NMRAALFAIQ
KLFADGGRRV PVMSSATITD RSGRTLSGQT IAAYYQSVAH VDLSYIGINC ALGADEMRPY
VEELAGLSRF PVACVPNAGL PNELGEYDET PESMGALLGE FANNGWLNFA GGCCGTRPEH
IAAIADAVAG VAPRKPAEPK PFTSLSGLEP LVITPESNFT MIGERTNVTG SRKFKRLIMN
DHYEEAVEVA RQQVEGGANI IDVCMDEGML ESEAAMTRFL NLIAAEPDIA RVPVMIDSSK
FTVIEAGLKC IQGKGVVNSI SLKEGEEAFK EHASLIRRYG AAVVVMAFDE TGQATTVDHR
LTIARRAYRI LTEELGFPPE DIIFDPNILT VGTGIEEHAD YAVSFIEAVR QIKAEMPLCK
VSGGVSNISF SFRGNDPVRE AMHAAFLYHA IKAGLDMGIV NAGQLEVYDE IEPELRERVE
DVLLNRRADA TERLIDFASS YTREETEKQD VKQWRTGTLE ERMSHALVKG IADHVDEDVA
EALEKYPSPL SIIEGPLMDG MNVVGGLFGE GKMFLPQVVK SARVMKKAVA ILEPLMEEEK
RKSGKTHAKG KMVIATVKGD VHDIGKNIVG VVLRCNGYEV EDLGVMVPAK QILDAAREMK
ADVVGLSGLI TPSLDEMIHV AKEMKRLKMN IPLLIGGATT SGKHTAVKIA PVYDGPSVHV
GDASLAVGVL GKLLSSTQRD GFVAANADKQ ATLRENFERT QKQRTLLPLA EARARKVEVE
WRAEDVAKPA FVGTRTLTED DIPVSDLVPW IDWSPFFHAW ELKGLYPAIL DHERYGERAR
ELFDDGQKLL RRICDEKLLR ARGVYGFFPA ASEGEDIVIY DQERENERAR FYFLRQQEDK
RPCFCLADYV APASSQLQDH IGGFTVTAGL GTDELVAEFE RDHDDYQAIM VKALADRLAE
AFAEMLHKRV RDEWGYGKQE DIDFQSVLSE NYRGIRPAFG YPACPDHSDK STLFSLLDAT
EATGVSLTES MAMTPTAAVS GIYLGHPQSR YFAVRRLGRD QVEDYAARKG ISRQEAERWL
APYLTY
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