Gene Hoch_5279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5279 
Symbol 
ID8547691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7257196 
End bp7258284 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content73% 
IMG OID646389953 
Productoxidoreductase FAD/NAD(P)-binding domain protein 
Protein accessionYP_003269657 
Protein GI262198448 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTATTTC GACCCAAACG ACCCCGAAGC AGCGAGCGCG ACGACTCGGC CCGACGCCTG 
CAACAGCGCG AGCGGCAGTT GCGCACCGCG CCGACCCCCC GCGGCGACGC GAGCAGCGAT
CCCGAGCTGA GCGCGCTGCT CACCCACGTC GCCGCACGCC GCAGCGCGCG CGCTCGCTCG
CTGTCTCGTT ACGGGGGCGA TTTTTTTTCG AACGACACGA CGAAGTCCCG CAGCGACAGC
GGTCGCCGCG CACCGGCGAG CAGTGAGCGC GCGCCGGGTC CAGACGCAAC CGCTGCCCCG
CTCGCGCTCA CCGCCCGGCC CGGCGCCGCT GGCGGACCGC CGCGCCCGCC GGCGGCGAAC
CCGGCGCCGC TGGGCGACGA GAAGCGCGTG CTCAGCGGCG CGCCGGCCAC GGTGCTCGAG
GTCGAGACGG TGGCCGCCGA CGTGCGCATC CTGCGCGTGG GACGGCCCGT GGGCTTCTCG
TTTCGCGCCG GCAACCACGT CAAGATGGGC GTGCCCGGCG CGGCCAAGAT GCGCTCGTAC
TCCATCGCCT CGGCGCCGCA CGAGGCGCAT CTCGAGTTCT GCATCGAGCT GGTCCCCGGT
GGCGTCCTGT CGCCGCGCCT GTTCGCGCTC ACGCCGGGTA GCCCGGTGCG CCTAGGCCCC
GGCGGCAAAG GCTCGTTCGT GCTGTCCTCG TCGGCGCGCG TGCACCTCAT GGTGGCCACG
GTCACCGGCA TCGCGCCGCT GCGCAGTATG CTCCGCGACG CCGTGCGCGG CGGCTCGCGC
GATCGCTTCG TGATCCTGCA CGGCGCCAGC TACGCCGACG AGCTCGCCTA CCGCCGGGAA
CTCGAGGACC TGGCCGCGCG CTTGCCTCAG GTCGACTACC AGGTCACGCT CAGCCGCCCG
GACGAGGCCC GCAACCGCGG CTGGAGCGGC GAACGCGGCC GCGTCGATCC CCTGGCCGAG
CGCGTGGCCC AGCAGCTCGA TCCCGCCGCG GTCCAGGTCT ACGCCTGCGG CAACAGCGGC
ATGATCGCCA AGGTCAAGCA ACAGCTCGGC GCCCGCGGCT TCCGCGTCAG CAGCGAGAGC
TTCGACTGA
 
Protein sequence
MVFRPKRPRS SERDDSARRL QQRERQLRTA PTPRGDASSD PELSALLTHV AARRSARARS 
LSRYGGDFFS NDTTKSRSDS GRRAPASSER APGPDATAAP LALTARPGAA GGPPRPPAAN
PAPLGDEKRV LSGAPATVLE VETVAADVRI LRVGRPVGFS FRAGNHVKMG VPGAAKMRSY
SIASAPHEAH LEFCIELVPG GVLSPRLFAL TPGSPVRLGP GGKGSFVLSS SARVHLMVAT
VTGIAPLRSM LRDAVRGGSR DRFVILHGAS YADELAYRRE LEDLAARLPQ VDYQVTLSRP
DEARNRGWSG ERGRVDPLAE RVAQQLDPAA VQVYACGNSG MIAKVKQQLG ARGFRVSSES
FD