Gene Hoch_5278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5278 
Symbol 
ID8547690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7255937 
End bp7256881 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content68% 
IMG OID646389952 
ProductFHA domain containing protein 
Protein accessionYP_003269656 
Protein GI262198447 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCAG CGGGCCAATC AAAACTGCTC CAGGCCTTTG CCGCTGATAA CCTCGCTCGA 
CTCGCGGGCG CTGATGGCAT CTGCCAGGAG CAAATCTTCT CCCACGCCGT CGCGCGAACG
AAGGCCGGTC TCGTCGATCA ATGGGGGCGC CTGCACCACA TCGGCGAGCG CGTGGCCATC
GGTCGCCGTC CGAGCACGCA GGGCATCTTC ATCCTCGAGG GGTCGATCTC GCGCGAGCAC
GCCGAGGTGT ATTTCGACGA GGATGTCGGC GCGTGGTTCG TGCGCGACCT CGACAGCAAG
AACGGGACGC TGGTCAACGA TGAGGTGGTG ACTGCGCCGT CGCTGTTGCG CAGCGGAGAT
ATCGTGTTCT TCGGCCAGGT CGGGTTTCTC TTTCTCATGC CGATAGACGG CGAGTTCGAC
GCCTCGTTCG ACAGCCCGCT GGCGAGTGAG ACGCTGCGCG CCGACCAGGG CATCCGCGCG
CCGACGCCGG CCGAGGACGG CCAGACCGCG CGGCACCCGC TCGGGCCCGC GGGCGAGGCC
ACCGAGATGA GCGAGGACAG CGATGACGAC GAGATCACCC AGGTCGGCCT GCCGCACCTG
GCGATGCGTC TCATCGAACC CAGCGGCGGC GGCGGCGGCT TCCTCGAGAC CTCGGACAAG
CGCGTGCAGC TCACGGCCAC GCAGTTCGCG TTTTTGCAGA TTCTCACCCT ACGCATGAAG
GGCGAGCGCA GCCAGCCCGA GGCCGTGCGC GGGTTCATCC GCTCCTCCGA GCTGCTGGCC
GAGCTGCCCT GGGACACCCC GCACCCCGAG GAGAACCACC TCAAGCAGCT CGTGCGCCGC
GTGCGCCGCA GCCTCACCCG GGCCGGCCTG GGCAATATGG TGGAGTCGCG CCGCGGCTTT
GGCTATCGCT TGCGGGTGAC GCCGAGCGAG GTCGACGCCA CCTGA
 
Protein sequence
MGAAGQSKLL QAFAADNLAR LAGADGICQE QIFSHAVART KAGLVDQWGR LHHIGERVAI 
GRRPSTQGIF ILEGSISREH AEVYFDEDVG AWFVRDLDSK NGTLVNDEVV TAPSLLRSGD
IVFFGQVGFL FLMPIDGEFD ASFDSPLASE TLRADQGIRA PTPAEDGQTA RHPLGPAGEA
TEMSEDSDDD EITQVGLPHL AMRLIEPSGG GGGFLETSDK RVQLTATQFA FLQILTLRMK
GERSQPEAVR GFIRSSELLA ELPWDTPHPE ENHLKQLVRR VRRSLTRAGL GNMVESRRGF
GYRLRVTPSE VDAT