Gene Hoch_5277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5277 
Symbol 
ID8547689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7255599 
End bp7255979 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content72% 
IMG OID646389951 
Productcobalamin (vitamin B12) biosynthesis CbiX protein 
Protein accessionYP_003269655 
Protein GI262198446 
COG category[S] Function unknown 
COG ID[COG2138] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGACA GCGCGTTTCT TCTCATCGCC CACGGCAGCA GCGACCCGAG CTGGGCCGAG 
CCCTTTCGTC AGCTCGCGCA GCACAGCGGC GCCGGCCTGG CCTTTCTCGA CCTGGCCGAG
CCCTCGATCG CGGACGCCGT CGACCAGGCC GTGGCCGCGG GAGCGCGCAC GCTGCGGCTC
TTGCCCCTGT TCATGGCCGT GGGCAAGCAC GTCAAACGCG ACATCCCGGC CATCGTCGAC
GAGCTGCGCG CCCGCCACCC AGCGTGCGCC ATCGAGCTGC TGCCCGCGCT CGGCCAGGAT
CCCGCGTTCT GGCAGACGCT GCGCGACTTC GTCGCCGCTC AGGTGGCGTC GACCTCGCTC
GGCGTCACCC GCAAGCGATA G
 
Protein sequence
MADSAFLLIA HGSSDPSWAE PFRQLAQHSG AGLAFLDLAE PSIADAVDQA VAAGARTLRL 
LPLFMAVGKH VKRDIPAIVD ELRARHPACA IELLPALGQD PAFWQTLRDF VAAQVASTSL
GVTRKR