| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5255 |
|---|
| Symbol | |
|---|
| ID | 8547667 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 7225118 |
|---|
| End bp | 7225909 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 646389929 |
|---|
| Product | glycerophosphoryl diester phosphodiesterase |
|---|
| Protein accession | YP_003269633 |
|---|
| Protein GI | 262198424 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCAAA CTCCCCTCGT GACACAGCCG GTTTTCTACG CGCATCGCGG CGCCGCCGCG
GAACAACCCG AAAATACTCT GCCCGCCTTC GCGCGCGCGC TCGAGCTGGG CGCCGATGTC
CTCGAGACCG ACGTGCACCT GAGCGCCGAC GGCCACGTGG TGATCTCCCA CGATCCCGTG
CTCACGCGCA TGGCCGGCGT GGCTGTCCCG GTGCGGCGCG CGCAGCTCGC GCGCATCCGC
GAGCTCGACG CCGGCTTCGG CTTCGTCGAC GCGCGCGGCC AGCGTCCCTT CGAGGGTCGC
GGCTACCGCA TCCCGACCCT CGAAGAGGCG CTGCTCGCGT TTCCCGATAC GCCCTTCAAC
GTCGATATCA AACAGCCGGG CACGCGCATC GTGCGCGCGG TGCTCGACCT CTTGCGCCGG
CTGCGGGCCA GCGAGCGCGT GGTGCTGGCC AGCTTCCACT ACAGCACCCT GCTGGCCGTG
CGCGGCCTGG GCTTCGCCGG CCGCACCAGC ATGGCGCGGC AGGAGGTCGC CACCCTGTAC
GCCACGCCCA AGCGCGCCTA TCGCCGCCTG CCGTTGACCG GACAGATGGT CCAGATCCCG
GTCAAGGCCG GCCCGGTGCG CTTGGACACG CCGCGCTTTT TGGCCAAATG CCACGCCCTG
GGCCTGCGCG TGGACTACTG GACCATCAAC GATCCCGCCG AGGCCCGGCG TTTGCTCGAT
CTCGGCGCCG ACGGCATCAT GACCGACGAC CCCGAGGCCA TCGCGCCGGT GTTCGCCGAG
CGGCGCGGCT GA
|
|---|
| Protein sequence | MSQTPLVTQP VFYAHRGAAA EQPENTLPAF ARALELGADV LETDVHLSAD GHVVISHDPV
LTRMAGVAVP VRRAQLARIR ELDAGFGFVD ARGQRPFEGR GYRIPTLEEA LLAFPDTPFN
VDIKQPGTRI VRAVLDLLRR LRASERVVLA SFHYSTLLAV RGLGFAGRTS MARQEVATLY
ATPKRAYRRL PLTGQMVQIP VKAGPVRLDT PRFLAKCHAL GLRVDYWTIN DPAEARRLLD
LGADGIMTDD PEAIAPVFAE RRG
|
|---|
| |