Gene Hoch_5245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5245 
Symbol 
ID8547657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp7206588 
End bp7208624 
Gene Length2037 bp 
Protein Length678 aa 
Translation table11 
GC content70% 
IMG OID646389919 
ProductAldehyde ferredoxin oxidoreductase 
Protein accessionYP_003269623 
Protein GI262198414 
COG category[C] Energy production and conversion 
COG ID[COG2414] Aldehyde:ferredoxin oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.34783 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.747579 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACTG CGCTCGTCCC CCGAGACCGC CCGCTCTACG GCGTGCAAGG CCGCATTCTG 
TGTGTCGACC TCGGCGAACG CCGTTCGTGG GTCGAAGACA TCGAGCCCGC CGTCTACCGC
CAGTTCCTGG CCGGCTACGG CCTGGGCGCG TGGCTGATGT GGAAGCACTT CCCGGCCGGC
AGCGACGCGC TCGCGCCCGA GGCCTGCTTC GCGATCTGCG CCGGCATGCT CACGGGCACC
CGCGCGCCGT TTTCGGGACG CATCCAGATC GTCGGCAAGT CGCCGCTCAC GGGCACCTGG
GCCGACTCCA ACTCGGGCGG CAGCGTCGCC AGCCACCTCC GCCGCGCCGG CTACGACGCG
CTGCTGGTGC GCGGCTGCGC GGCCGAGCCG ACTGTGCTGG TGGTGCGCGA CGGCGAGGTC
AGCTTCGAAC CCGCGGGCGA GCTCTGGGGC CAGGAGGTGC CGCAGGCCTT CGACACCCTG
CGCGAGCGCT ACGGCTCCAA GCGCGAGGTC GGGGTCTCGG CCATCGGCCC GGCGGGCGAG
CGCCAGGCGC GCATCGCCTC GGTGCAGAAC GACCGCTACC ACGCCTTTGG ACGCCAGGGC
TTTGGCGCCA TCTACGGCAG CAAGCAGCTC AAGGCCATCG TGGTCAGCGG CACCGGCGAG
CTGCCGATCG CCGATCCCAA GACCTTCAAG AAGCTGTGCA AGCAGGTCAA CGACACCTAC
AAGCGCGACG TCGGCTGGCT GATGCGCATC GTGGTGTGGG CCAGCAAGCC CAAGAAGTGG
CTGGGCTGGA TGTATCGCTT CATGGCCCGG CACGGGATCA AGATCCAGGC GCCGGTGCCC
GCCATGCGCC AGCTCTGGAG CGATCGCGGG ACCACGGCCG CGGCCGCGCT CAGCGTCGAG
AACGGCGACA CGCCGATCAA GAACTGGAAG GGCGTGGGCG CGCGCGATTT CCCGCTGGCC
ACCAAGGGCC ACAAGATCGA CGGTAAAGAG GTCGATAAAT ACATCACCAA GAAGCTCTCG
TGCGGCGACT GCCCCATGCC GTGCAAGGGC ATCGTGCGGG TCAAGTCGCG CAAGCTCGAG
GACGTGCGCC GGCCCGACTA CGAGACCCTG TGCGGCTTTG GCGCCAACCT GCTCAACGAC
GACCTCGAGA TCGTGGTCGC CTGTCACGAC GCCTGCAACC GCTACGGCAT GGACGCCATC
AGCTCGTCGG CGACCCTGGC GTGGGTGGCC GAGATGTTCG AGCTGGGCGT GATCACGGCC
GACGACCTCG ACGGCGTCGC GATGCGCTGG GGCGACGGCG AGGCCGCGCT GGCGCTGACC
GTCAAGATGG GCACCGGCGA GGGCTGCGGC GCCTGGCTGG GGCAGGGCAT CAAGCGCGCG
GCCGAGCACC TGGGCCGCGG CAGCGAGGCC TACGCCGTGC ACGTGCACGG CCAGGAGCCG
GCGTATCACG ACTCGCGCTT CAGCTCGCTC ATGGGCGTCA CCTTCATCGC CGACGCCACG
CCCGGGCGCC ACACCGCGGG CTCGGCCTCG TGGAACGAGA CCTTTGGCGC CGGCTTCCCG
CTGCCCAAGG CCGCGCCCAA GCGCGAGACC AATGTCAGTT GGCACGGCAC CAAGGGCAAG
GGCCTGGCGC AGGCGCACTA CGCCAACAGC CACCAGGTGC TCAACGGCCT GGGCCTGTGC
ATGTTCACCT CGCTCACCGG CACGCTGCCG TGGCTCGACA TGGTGCACGC GCTCACCGGC
TGGGAGATCA CCGAGGGCGA TCTGCTGGCC TGCGGCGAGC GCATTCAGAA CCTGCGCACC
GCCTTCAACC GCCGCGAGGG CATCGCGCCC GGCGATTTCC GCCCGCACCC GCGCATGCTC
GGCGAGGGCG ATGGCAAGCT CGAGAGCGGC CCGCTGGCGG GCGTGCAGGC GCCGCTGCTG
GAGCTGCGCC GCGACTACTT CCAGGCCATG CACTGGGACC CGGAGACCGG ACACCTGTCC
CGAGACCGCG CCGAGGCGCT GGGCATCGAC GAGCTGCTCA GCGGCTACCT GGCGTAG
 
Protein sequence
METALVPRDR PLYGVQGRIL CVDLGERRSW VEDIEPAVYR QFLAGYGLGA WLMWKHFPAG 
SDALAPEACF AICAGMLTGT RAPFSGRIQI VGKSPLTGTW ADSNSGGSVA SHLRRAGYDA
LLVRGCAAEP TVLVVRDGEV SFEPAGELWG QEVPQAFDTL RERYGSKREV GVSAIGPAGE
RQARIASVQN DRYHAFGRQG FGAIYGSKQL KAIVVSGTGE LPIADPKTFK KLCKQVNDTY
KRDVGWLMRI VVWASKPKKW LGWMYRFMAR HGIKIQAPVP AMRQLWSDRG TTAAAALSVE
NGDTPIKNWK GVGARDFPLA TKGHKIDGKE VDKYITKKLS CGDCPMPCKG IVRVKSRKLE
DVRRPDYETL CGFGANLLND DLEIVVACHD ACNRYGMDAI SSSATLAWVA EMFELGVITA
DDLDGVAMRW GDGEAALALT VKMGTGEGCG AWLGQGIKRA AEHLGRGSEA YAVHVHGQEP
AYHDSRFSSL MGVTFIADAT PGRHTAGSAS WNETFGAGFP LPKAAPKRET NVSWHGTKGK
GLAQAHYANS HQVLNGLGLC MFTSLTGTLP WLDMVHALTG WEITEGDLLA CGERIQNLRT
AFNRREGIAP GDFRPHPRML GEGDGKLESG PLAGVQAPLL ELRRDYFQAM HWDPETGHLS
RDRAEALGID ELLSGYLA