Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_5241 |
Symbol | |
ID | 8547653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 7201388 |
End bp | 7204132 |
Gene Length | 2745 bp |
Protein Length | 914 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 646389915 |
Product | putative signal transduction protein with Nacht domain |
Protein accession | YP_003269619 |
Protein GI | 262198410 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5635] Predicted NTPase (NACHT family) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.668655 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCACGCCG AGGTCGAGGC GCTGATTACG GACATCGGTC CGGATACCGC CGCCAGCCTG CGCGCGGCCA CGGTGTCGGG CATCTTCGAC CTCAGCGCGC TCGACGTCGG CATCGGCGCC CACGCCGAGA CCCTGCTGCG CGACTCGCGC ATCCAGTCCT TCGTCGCCGA GTTCCGCCAG CGGCTGGCGC CGCGCTTCGC CACCTGGAAC CTGGGCACGG TGGGCGCGAT CGCCGACGGA CCGACCCGGC GTCCGATCGA CGTCGGCCTC GACGAGATGT ATCTGCCGCT GCGCATGCAC GGCGGCTTCT CGCTCGAGGA GACCGACATC GGCGCGCCGA TATCGCCCGA CGAGCTGCTC GCCCGCGAGC GCCCGCTGGT CATCCGCGGC CCCGCGGGGA CGGGCAAGAC CACGTGGATG CAGTGGACCT TCCGCCGCCT GCTCGAGCGC GACGACGCGG TGCCGTGCCT GGTCGAGCTG CGCGATCTGG CCAAGGTGTG GGGCGAGGCC AAGCCGGCGC GACGCACGCT CGACACCTAT CTGCGCGACT GGGTGGCCGA GTGGGTCGGC GGCGCCTGGC AGGAGTCGAT CGACGACATG CTGCGCGACC TCCTCGAGTT CGACGAGGGC CCGCGGCCGG TGCTGTTAAT CGACGGCTGG GACGAAATCG GCGACCTCGG CAGCGAGCTG CGGCAGAAGC TCGCCGGCTT CCTCAAGGTG TTCCCGCGCG TGCTCGCGGT GGTCACCAGC CGGCCCTACG GCCAGGGCAA GCCGACCGAC AGCGACGGCT TCGAGACCGT GGACATTCAG CCGCTGTCCA ACGGCGACAT CGACACCATG GCCGAGCGCT TCTTCCGCCT GGTGCACGGC GCCGACGCGC GCGCCAGCGA GGAGGCGGGC ACGCGCTTCC GCAACGAGAT CGCGGCCTCG GAGGACGCGC TGCGGCTGGC GCGCACGCCG CTCACGCTGA CCATGATGCT GCTGATCAGC CGCGATCGCA GCCTGCCCGA CAAGCGCCAC GCGCTGTACC AGATGTGCAT CGAGAACATG CTGGCCGCGC GTCCCGACCG CAAGGAGCAG GAGGGCGCGC GTCTGGGCGA GGTCGAGTGG CGGCCCGACG ATCGCGGCGC GCGCTTCCGC GCCCTGGCGG CGATGGCGGC GCAGGCGCAG CAGTCGGGCT ACGGCGAGGG GCGCGGGCAG ATCGTCATGC CCTGGCGCCA GGCCCTGCGC TACATGCCCG AGGAGTGGAG CGATGACCAG CGCCGCGGCT TCCTGGCCTG GCTGGTGGGC GCCGCCGGCA TCCTCAACGA CCGCACCGAC GGCTCGGTGG CCTTTGCGCA CCTGAGCTTC CAGGAGTATC TCACCGCCTG GCACCTGCTC GTGCACCGCG AGGGCGAGGC CGCGCGCATC GGCCTGTGCC GCGAGCACCG CACCGACATC CACTGGTGGG AGACGCTGCG GCTGTGGGCC GCGCTGGTGC ACGAGGGCGA GCCCATGCGT CTGCACCCGG TGCTGCGGCA CCTCAGCCTC GACGGCATCG GCGGCGCGCG CTTGGCCGGA CACGGGGACG AACAAGCCGA CGAGATCGAG GCCCGCGCCG CCGGCTTCTG GCTGGCCGGC GCCATGCTCG CCGACGGCCT CGGCGCCGAG CGCGATATGG ATAGCTGGGT GGGCGCGCTC AGCGACGCCT TCTGGATGCC GGGCGGTGAG CACGCCGACG AGTGCGCGCG CGCCTGGCGG CGCAGCCAGC AGCGCGAGCG GCGCCAGCGC ATCGCGGCCG CCTGGCCTAC ATTTACGCCC GCGCTCAGTT GGCTGCGCTG GCTGCGCGCG CGCCACTGGC TGCACAACCT CAACCTGGGC GCGCAGGCGC CCGAGCTGGC GGCGGCCCCG ATCCTCACCC TGCTGCGCGG CGGCCGGCGC CTGGAGAGCG CCGACGAGGT GGCCAACGCG CGCGTGCTCA CGGGCGCGTC GCCGTGGTGG CCGACCCTGC TGCCCGAGCT GGCGATCCTG CGCCTGTGGC CCGGGCAGCG GCCGCGCGTG GGCGCCGTGC TGCAGCTCTG CGTGTCGCTG GGCGCCTCGG CCGAGGAGCT GCCCGCGCTG CTGCAGAGCA TGCTCGCCAG CGGCTCGCCG GCCACCGCGC CGGCCGGGGC GCGCGTGTTC TCGCGCGACG ATGTCGAGGG CGATGTGCAG TCCTGGATCA CCCAGCTCAC GCTGCTCAGC GACAAGCACC TGCCGGCCTC GTCGAGCTGG GGCCAGCGCC TGAGCGCCGC GAGCTTTGCG CAGTGGATGC TGGACGCCGC CTGGGTCGAC ATCTACACCC GCGAGGCCGA GATCGGCGGG CGGCTGGCGT TCTCGGTCGC GCACGACGAC GGCGGCGCGC TCACGCCGCT GTTCCGCATC GCCTGCCGGG CCTCGCTCGA CGAGACCACC GACACGCCCG CGCTCACCGA GGCGGTGCGC GCGCTGCCGG CGGACACCGA CCCGCTGTGG CCGGCGCTGG CCCGCCACGT GGCCCGGCAG TCCACGGACG CGGATCGCGC GCTGCTCGAG TCGGTGGCCC GCGATCCCGG CCTGCGCGCC CCGCCGCTGT CGTGGGGGCT GCGCTTTTTC GTCCGCGGCG ACGTGTTGCT GGCCGACGGC AGCGTGTGCA CGCTCGACGA GCTATGCGCC GAGAGCGGCC TGCAGCCGCT GCCCGCGCTC GAGGACATGC CGCCCGAGCC CGACCTGCTG CCGGGCGCGG GCTGA
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Protein sequence | MHAEVEALIT DIGPDTAASL RAATVSGIFD LSALDVGIGA HAETLLRDSR IQSFVAEFRQ RLAPRFATWN LGTVGAIADG PTRRPIDVGL DEMYLPLRMH GGFSLEETDI GAPISPDELL ARERPLVIRG PAGTGKTTWM QWTFRRLLER DDAVPCLVEL RDLAKVWGEA KPARRTLDTY LRDWVAEWVG GAWQESIDDM LRDLLEFDEG PRPVLLIDGW DEIGDLGSEL RQKLAGFLKV FPRVLAVVTS RPYGQGKPTD SDGFETVDIQ PLSNGDIDTM AERFFRLVHG ADARASEEAG TRFRNEIAAS EDALRLARTP LTLTMMLLIS RDRSLPDKRH ALYQMCIENM LAARPDRKEQ EGARLGEVEW RPDDRGARFR ALAAMAAQAQ QSGYGEGRGQ IVMPWRQALR YMPEEWSDDQ RRGFLAWLVG AAGILNDRTD GSVAFAHLSF QEYLTAWHLL VHREGEAARI GLCREHRTDI HWWETLRLWA ALVHEGEPMR LHPVLRHLSL DGIGGARLAG HGDEQADEIE ARAAGFWLAG AMLADGLGAE RDMDSWVGAL SDAFWMPGGE HADECARAWR RSQQRERRQR IAAAWPTFTP ALSWLRWLRA RHWLHNLNLG AQAPELAAAP ILTLLRGGRR LESADEVANA RVLTGASPWW PTLLPELAIL RLWPGQRPRV GAVLQLCVSL GASAEELPAL LQSMLASGSP ATAPAGARVF SRDDVEGDVQ SWITQLTLLS DKHLPASSSW GQRLSAASFA QWMLDAAWVD IYTREAEIGG RLAFSVAHDD GGALTPLFRI ACRASLDETT DTPALTEAVR ALPADTDPLW PALARHVARQ STDADRALLE SVARDPGLRA PPLSWGLRFF VRGDVLLADG SVCTLDELCA ESGLQPLPAL EDMPPEPDLL PGAG
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