| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5241 |
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| Symbol | |
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| ID | 8547653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 7201388 |
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| End bp | 7204132 |
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| Gene Length | 2745 bp |
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| Protein Length | 914 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 646389915 |
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| Product | putative signal transduction protein with Nacht domain |
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| Protein accession | YP_003269619 |
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| Protein GI | 262198410 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5635] Predicted NTPase (NACHT family) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.668655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCACGCCG AGGTCGAGGC GCTGATTACG GACATCGGTC CGGATACCGC CGCCAGCCTG
CGCGCGGCCA CGGTGTCGGG CATCTTCGAC CTCAGCGCGC TCGACGTCGG CATCGGCGCC
CACGCCGAGA CCCTGCTGCG CGACTCGCGC ATCCAGTCCT TCGTCGCCGA GTTCCGCCAG
CGGCTGGCGC CGCGCTTCGC CACCTGGAAC CTGGGCACGG TGGGCGCGAT CGCCGACGGA
CCGACCCGGC GTCCGATCGA CGTCGGCCTC GACGAGATGT ATCTGCCGCT GCGCATGCAC
GGCGGCTTCT CGCTCGAGGA GACCGACATC GGCGCGCCGA TATCGCCCGA CGAGCTGCTC
GCCCGCGAGC GCCCGCTGGT CATCCGCGGC CCCGCGGGGA CGGGCAAGAC CACGTGGATG
CAGTGGACCT TCCGCCGCCT GCTCGAGCGC GACGACGCGG TGCCGTGCCT GGTCGAGCTG
CGCGATCTGG CCAAGGTGTG GGGCGAGGCC AAGCCGGCGC GACGCACGCT CGACACCTAT
CTGCGCGACT GGGTGGCCGA GTGGGTCGGC GGCGCCTGGC AGGAGTCGAT CGACGACATG
CTGCGCGACC TCCTCGAGTT CGACGAGGGC CCGCGGCCGG TGCTGTTAAT CGACGGCTGG
GACGAAATCG GCGACCTCGG CAGCGAGCTG CGGCAGAAGC TCGCCGGCTT CCTCAAGGTG
TTCCCGCGCG TGCTCGCGGT GGTCACCAGC CGGCCCTACG GCCAGGGCAA GCCGACCGAC
AGCGACGGCT TCGAGACCGT GGACATTCAG CCGCTGTCCA ACGGCGACAT CGACACCATG
GCCGAGCGCT TCTTCCGCCT GGTGCACGGC GCCGACGCGC GCGCCAGCGA GGAGGCGGGC
ACGCGCTTCC GCAACGAGAT CGCGGCCTCG GAGGACGCGC TGCGGCTGGC GCGCACGCCG
CTCACGCTGA CCATGATGCT GCTGATCAGC CGCGATCGCA GCCTGCCCGA CAAGCGCCAC
GCGCTGTACC AGATGTGCAT CGAGAACATG CTGGCCGCGC GTCCCGACCG CAAGGAGCAG
GAGGGCGCGC GTCTGGGCGA GGTCGAGTGG CGGCCCGACG ATCGCGGCGC GCGCTTCCGC
GCCCTGGCGG CGATGGCGGC GCAGGCGCAG CAGTCGGGCT ACGGCGAGGG GCGCGGGCAG
ATCGTCATGC CCTGGCGCCA GGCCCTGCGC TACATGCCCG AGGAGTGGAG CGATGACCAG
CGCCGCGGCT TCCTGGCCTG GCTGGTGGGC GCCGCCGGCA TCCTCAACGA CCGCACCGAC
GGCTCGGTGG CCTTTGCGCA CCTGAGCTTC CAGGAGTATC TCACCGCCTG GCACCTGCTC
GTGCACCGCG AGGGCGAGGC CGCGCGCATC GGCCTGTGCC GCGAGCACCG CACCGACATC
CACTGGTGGG AGACGCTGCG GCTGTGGGCC GCGCTGGTGC ACGAGGGCGA GCCCATGCGT
CTGCACCCGG TGCTGCGGCA CCTCAGCCTC GACGGCATCG GCGGCGCGCG CTTGGCCGGA
CACGGGGACG AACAAGCCGA CGAGATCGAG GCCCGCGCCG CCGGCTTCTG GCTGGCCGGC
GCCATGCTCG CCGACGGCCT CGGCGCCGAG CGCGATATGG ATAGCTGGGT GGGCGCGCTC
AGCGACGCCT TCTGGATGCC GGGCGGTGAG CACGCCGACG AGTGCGCGCG CGCCTGGCGG
CGCAGCCAGC AGCGCGAGCG GCGCCAGCGC ATCGCGGCCG CCTGGCCTAC ATTTACGCCC
GCGCTCAGTT GGCTGCGCTG GCTGCGCGCG CGCCACTGGC TGCACAACCT CAACCTGGGC
GCGCAGGCGC CCGAGCTGGC GGCGGCCCCG ATCCTCACCC TGCTGCGCGG CGGCCGGCGC
CTGGAGAGCG CCGACGAGGT GGCCAACGCG CGCGTGCTCA CGGGCGCGTC GCCGTGGTGG
CCGACCCTGC TGCCCGAGCT GGCGATCCTG CGCCTGTGGC CCGGGCAGCG GCCGCGCGTG
GGCGCCGTGC TGCAGCTCTG CGTGTCGCTG GGCGCCTCGG CCGAGGAGCT GCCCGCGCTG
CTGCAGAGCA TGCTCGCCAG CGGCTCGCCG GCCACCGCGC CGGCCGGGGC GCGCGTGTTC
TCGCGCGACG ATGTCGAGGG CGATGTGCAG TCCTGGATCA CCCAGCTCAC GCTGCTCAGC
GACAAGCACC TGCCGGCCTC GTCGAGCTGG GGCCAGCGCC TGAGCGCCGC GAGCTTTGCG
CAGTGGATGC TGGACGCCGC CTGGGTCGAC ATCTACACCC GCGAGGCCGA GATCGGCGGG
CGGCTGGCGT TCTCGGTCGC GCACGACGAC GGCGGCGCGC TCACGCCGCT GTTCCGCATC
GCCTGCCGGG CCTCGCTCGA CGAGACCACC GACACGCCCG CGCTCACCGA GGCGGTGCGC
GCGCTGCCGG CGGACACCGA CCCGCTGTGG CCGGCGCTGG CCCGCCACGT GGCCCGGCAG
TCCACGGACG CGGATCGCGC GCTGCTCGAG TCGGTGGCCC GCGATCCCGG CCTGCGCGCC
CCGCCGCTGT CGTGGGGGCT GCGCTTTTTC GTCCGCGGCG ACGTGTTGCT GGCCGACGGC
AGCGTGTGCA CGCTCGACGA GCTATGCGCC GAGAGCGGCC TGCAGCCGCT GCCCGCGCTC
GAGGACATGC CGCCCGAGCC CGACCTGCTG CCGGGCGCGG GCTGA
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| Protein sequence | MHAEVEALIT DIGPDTAASL RAATVSGIFD LSALDVGIGA HAETLLRDSR IQSFVAEFRQ
RLAPRFATWN LGTVGAIADG PTRRPIDVGL DEMYLPLRMH GGFSLEETDI GAPISPDELL
ARERPLVIRG PAGTGKTTWM QWTFRRLLER DDAVPCLVEL RDLAKVWGEA KPARRTLDTY
LRDWVAEWVG GAWQESIDDM LRDLLEFDEG PRPVLLIDGW DEIGDLGSEL RQKLAGFLKV
FPRVLAVVTS RPYGQGKPTD SDGFETVDIQ PLSNGDIDTM AERFFRLVHG ADARASEEAG
TRFRNEIAAS EDALRLARTP LTLTMMLLIS RDRSLPDKRH ALYQMCIENM LAARPDRKEQ
EGARLGEVEW RPDDRGARFR ALAAMAAQAQ QSGYGEGRGQ IVMPWRQALR YMPEEWSDDQ
RRGFLAWLVG AAGILNDRTD GSVAFAHLSF QEYLTAWHLL VHREGEAARI GLCREHRTDI
HWWETLRLWA ALVHEGEPMR LHPVLRHLSL DGIGGARLAG HGDEQADEIE ARAAGFWLAG
AMLADGLGAE RDMDSWVGAL SDAFWMPGGE HADECARAWR RSQQRERRQR IAAAWPTFTP
ALSWLRWLRA RHWLHNLNLG AQAPELAAAP ILTLLRGGRR LESADEVANA RVLTGASPWW
PTLLPELAIL RLWPGQRPRV GAVLQLCVSL GASAEELPAL LQSMLASGSP ATAPAGARVF
SRDDVEGDVQ SWITQLTLLS DKHLPASSSW GQRLSAASFA QWMLDAAWVD IYTREAEIGG
RLAFSVAHDD GGALTPLFRI ACRASLDETT DTPALTEAVR ALPADTDPLW PALARHVARQ
STDADRALLE SVARDPGLRA PPLSWGLRFF VRGDVLLADG SVCTLDELCA ESGLQPLPAL
EDMPPEPDLL PGAG
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